Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.233083
Ids
iduronate 2-sulfatase
X
X 27.0 cM
15931
Mm.233083
AW214631
expressed sequence AW214631
X
103028
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 48 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTATGGATCT
(
2
)
14.7
0.0147
P8 Cb GC
TCGTTAATCA
(
2
)
1.6
0.0016
Cb medulloblastoma
TTATGGATCT
(
2
)
9.2
0.0092
Cb medulloblastoma
TCGTTAATCA
(
2
)
4.6
0.0046
Cb medulloblastoma
TAGTAAGGAT
(
3
)
2.3
0.0023
P8 GC+1d culture
TTATGGATCT
(
2
)
10.3
0.0103
P8 GC+1d culture
TTTTGAGTGC
(
3
)
2.3
0.0023
P8 GC+1d culture
TAGTAAGGAT
(
3
)
1.1
0.0011
P8 GC+1d culture
TCGTTAATCA
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
TTATGGATCT
(
2
)
29.3
0.0293
P8 GC+SHH+1d culture
AGTTTGATAT
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
TCGTTAATCA
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
TTTTGAGTGC
(
3
)
1.2
0.0012
P1 cortex
TTATGGATCT
(
2
)
36.4
0.0364
P1 cortex
TTTTGAGTGC
(
3
)
9.1
0.0091
P1 cortex
TGTCTTCCTA
(
2
)
4.5
0.0045
Hypothalamus
TTATGGATCT
(
2
)
30.8
0.0308
Hypothalamus
TCGTTAATCA
(
2
)
3.6
0.0036
Hypothalamus
AGTTTGATAT
(
2
)
1.8
0.0018
Hypothalamus
TAGTAAGGAT
(
3
)
1.8
0.0018
Hypothalamus
TGATGATCAC
(
2
)
1.8
0.0018
Hypothalamus
TGTCTTCCTA
(
2
)
1.8
0.0018
E12.5 retina
TTATGGATCT
(
2
)
1.9
0.0019
E14.5 retina
TTATGGATCT
(
2
)
7.3
0.0073
E16.5 retina
TTATGGATCT
(
2
)
9.1
0.0091
E16.5 retina
TAGTAAGGAT
(
3
)
1.8
0.0018
E16.5 retina
TGATGATCAC
(
2
)
1.8
0.0018
E18.5 retina
TTATGGATCT
(
2
)
7.3
0.0073
E18.5 retina
TGATGATCAC
(
2
)
1.8
0.0018
P0.5 retina
TTATGGATCT
(
2
)
7.9
0.0079
P0.5 retina
TCGTTAATCA
(
2
)
2
0.002
P2.5 retina
TGATGATCAC
(
2
)
1.8
0.0018
P2.5 retina
TTATGGATCT
(
2
)
1.8
0.0018
P4.5 retina
TTATGGATCT
(
2
)
11.9
0.0119
P4.5 retina
AGTTTGATAT
(
2
)
2
0.002
P6.5 retina
TTATGGATCT
(
2
)
11.7
0.0117
P6.5 retina
TCGTTAATCA
(
2
)
1.7
0.0017
P10.5 crx- retina
TTATGGATCT
(
2
)
9.3
0.0093
P10.5 crx- retina
TCGTTAATCA
(
2
)
1.9
0.0019
P10.5 crx+ retina
TTATGGATCT
(
2
)
11.5
0.0115
P10.5 crx+ retina
TTCCTGATAG
(
2
)
3.8
0.0038
Adult retinal
TTCCTGATAG
(
2
)
22.2
0.0222
Adult retinal
TTATGGATCT
(
2
)
3.7
0.0037
Adult retinal
TTTTGAGTGC
(
3
)
1.9
0.0019
ONL
TTCCTGATAG
(
2
)
32.6
0.0326
ONL
TAGTAAGGAT
(
3
)
1.9
0.0019
ONL
TGTCTTCCTA
(
2
)
1.9
0.0019
ONL
TTATGGATCT
(
2
)
1.9
0.0019
