Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.234266	4833414L08Rik	RIKEN cDNA 4833414L08 gene	15		74599
Mm.234266	Sdc2	syndecan 2	15	15 12.4 cM	15529
Gene Ontology	cytoskeletal protein binding | integral to membrane | membrane
Human Homolog	SDC2[syndecan 2 (heparan sulfate proteoglycan 1, cell surface-associated, fibroglycan)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 33 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CGGAAGAAAG (2) 1.6 0.0016 P8 Cb GC TTAAAAGGAA (3) 1.6 0.0016 Cb medulloblastoma CCGAAAGTAA (2) 9.2 0.0092 P8 GC+1d culture CCGAAAGTAA (2) 2.3 0.0023 P8 GC+1d culture CGGAAGAAAG (2) 1.1 0.0011 P8 GC+1d culture GCCTAATATT (2) 1.1 0.0011 P8 GC+1d culture GTTTGGGGAT (2) 1.1 0.0011 P8 GC+1d culture TTAAAAGGAA (3) 1.1 0.0011 3T3 fibroblasts CCGAAAGTAA (2) 7 0.007 P1 cortex TTAAAAGGAA (3) 4.5 0.0045 Hypothalamus CCGAAAGTAA (2) 7.2 0.0072 Hypothalamus CGGAAGAAAG (2) 1.8 0.0018 Hypothalamus GCCTAATATT (2) 1.8 0.0018 E12.5 retina CCGAAAGTAA (2) 1.9 0.0019 E14.5 retina CCGAAAGTAA (2) 1.8 0.0018 E14.5 retina TTAAAAGGAA (3) 1.8 0.0018 E16.5 retina GCCTAATATT (2) 1.8 0.0018 E16.5 retina TTAAAAGGAA (3) 1.8 0.0018 E18.5 retina CCGAAAGTAA (2) 5.5 0.0055 E18.5 retina GTTTGGGGAT (2) 3.6 0.0036 E18.5 retina GCCTAATATT (2) 1.8 0.0018 P0.5 retina CCGAAAGTAA (2) 2 0.002 P0.5 retina GCCTAATATT (2) 2 0.002 P2.5 retina CCGAAAGTAA (2) 3.5 0.0035 P4.5 retina CCGAAAGTAA (2) 2 0.002 P4.5 retina CGGAAGAAAG (2) 2 0.002 P6.5 retina GCCTAATATT (2) 3.3 0.0033 P6.5 retina GTTTGGGGAT (2) 1.7 0.0017 P10.5 crx+ retina GTTTGGGGAT (2) 1.9 0.0019 P10.5 crx+ retina TTAAAAGGAA (3) 1.9 0.0019 Adult retinal CGGAAGAAAG (2) 1.9 0.0019 ONL CCGAAAGTAA (2) 1.9 0.0019 ONL TTAAAAGGAA (3) 1.9 0.0019