Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.235960	5730416O20Rik	RIKEN cDNA 5730416O20 gene	10		70557
Mm.235960	2900006A17Rik	RIKEN cDNA 2900006A17 gene	10		72913
Mm.235960	2900054D09Rik	RIKEN cDNA 2900054D09 gene	10		73013
Mm.235960	4833431D13Rik	RIKEN cDNA 4833431D13 gene	10		268307
Mm.235960	9430064K01Rik	RIKEN cDNA 9430064K01 gene	10		77294
Mm.235960	Ank3	ankyrin 3, epithelial	10	10 38.0 cM	11735
Gene Ontology	cytoskeleton | synapse
Human Homolog	ANK3[ankyrin 3, node of Ranvier (ankyrin G)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 67 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTTAATAAAC (6) 8.2 0.0082 P8 Cb GC TATGAGAAAA (6) 4.9 0.0049 P8 Cb GC GGAGATTTTA (6) 1.6 0.0016 P8 Cb GC TTATTAAAAA (6) 1.6 0.0016 P8 Cb GC TTCTTCAGAC (6) 1.6 0.0016 Cb medulloblastoma GGAGATTTTA (6) 4.6 0.0046 Cb medulloblastoma TATGAGAAAA (6) 2.3 0.0023 P8 GC+1d culture TATGAGAAAA (6) 12.6 0.0126 P8 GC+1d culture GGAGATTTTA (6) 8 0.008 P8 GC+1d culture GTTAATAAAC (6) 4.6 0.0046 P8 GC+1d culture TTATTAAAAA (6) 4.6 0.0046 P8 GC+1d culture TTCTTCAGAC (6) 2.3 0.0023 P8 GC+1d culture ATGACCAGTA (7) 1.1 0.0011 P8 GC+1d culture CCGCCTCCCA (6) 1.1 0.0011 P8 GC+1d culture TCATTTAGAG (6) 1.1 0.0011 P8 GC+SHH+1d culture GTTAATAAAC (6) 9.4 0.0094 P8 GC+SHH+1d culture TATGAGAAAA (6) 5.9 0.0059 P8 GC+SHH+1d culture TCATTTAGAG (6) 3.5 0.0035 P8 GC+SHH+1d culture TTCTTCAGAC (6) 3.5 0.0035 P8 GC+SHH+1d culture TTATTAAAAA (6) 2.3 0.0023 P8 GC+SHH+1d culture ATGACCAGTA (7) 1.2 0.0012 P8 GC+SHH+1d culture GGAGATTTTA (6) 1.2 0.0012 3T3 fibroblasts TTCTTCAGAC (6) 3.5 0.0035 E15 cortex GGAGATTTTA (6) 14.8 0.0148 P1 cortex GGAGATTTTA (6) 13.6 0.0136 P1 cortex GTTAATAAAC (6) 4.5 0.0045 P1 cortex TTCTTCAGAC (6) 4.5 0.0045 Hypothalamus TATGAGAAAA (6) 3.6 0.0036 Hypothalamus GGAGATTTTA (6) 1.8 0.0018 Hypothalamus GTGGGATGCT (6) 1.8 0.0018 Hypothalamus GTTAATAAAC (6) 1.8 0.0018 E12.5 retina TATGAGAAAA (6) 3.8 0.0038 E12.5 retina ATGACCAGTA (7) 1.9 0.0019 E12.5 retina GTGGGATGCT (6) 1.9 0.0019 E14.5 retina TATGAGAAAA (6) 3.6 0.0036 E14.5 retina TTATTAAAAA (6) 3.6 0.0036 E14.5 retina CCGCCTCCCA (6) 1.8 0.0018 E14.5 retina GGAGATTTTA (6) 1.8 0.0018 E14.5 retina GTTAATAAAC (6) 1.8 0.0018 E16.5 retina TATGAGAAAA (6) 5.4 0.0054 E16.5 retina CCGCCTCCCA (6) 1.8 0.0018 E16.5 retina GTGGGATGCT (6) 1.8 0.0018 E16.5 retina GTTAATAAAC (6) 1.8 0.0018 E16.5 retina TCATTTAGAG (6) 1.8 0.0018 E16.5 retina TTATTAAAAA (6) 1.8 0.0018 E18.5 retina GTTAATAAAC (6) 7.3 0.0073 E18.5 retina TATGAGAAAA (6) 3.6 0.0036 E18.5 retina TTCTTCAGAC (6) 3.6 0.0036 E18.5 retina GTGGGATGCT (6) 1.8 0.0018 P0.5 retina CCTTTATCTT (6) 2 0.002 P0.5 retina TATGAGAAAA (6) 2 0.002 P2.5 retina GTTAATAAAC (6) 8.8 0.0088 P2.5 retina TATGAGAAAA (6) 7 0.007 P2.5 retina TTCTTCAGAC (6) 3.5 0.0035 P2.5 retina ATGACCAGTA (7) 1.8 0.0018 P4.5 retina GTTAATAAAC (6) 9.9 0.0099 P4.5 retina TATGAGAAAA (6) 2 0.002 P4.5 retina TTATTAAAAA (6) 2 0.002 P6.5 retina TTATTAAAAA (6) 5 0.005 P6.5 retina TATGAGAAAA (6) 3.3 0.0033 P6.5 retina TTCTTCAGAC (6) 1.7 0.0017 P10.5 crx- retina TATGAGAAAA (6) 3.7 0.0037 P10.5 crx- retina TTATTAAAAA (6) 3.7 0.0037 P10.5 crx+ retina TATGAGAAAA (6) 1.9 0.0019 ONL CCTTTATCTT (6) 3.8 0.0038 ONL TATGAGAAAA (6) 1.9 0.0019 ONL TTATTAAAAA (6) 1.9 0.0019