Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.236878
4933439C20Rik
RIKEN cDNA 4933439C20 gene
17
66776
Mm.236878
2310047I15Rik
RIKEN cDNA 2310047I15 gene
11
78887
Mm.236878
9530037G02Rik
RIKEN cDNA 9530037G02 gene
11
320044
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 28 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CACACAAAAA
(
3
)
1.6
0.0016
Cb medulloblastoma
AAAGGACTAA
(
3
)
4.6
0.0046
Cb medulloblastoma
CGGCAGGAGG
(
4
)
2.3
0.0023
P8 GC+1d culture
CACACAAAAA
(
3
)
1.1
0.0011
P8 GC+1d culture
CATTGCTCGT
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
CACACAAAAA
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
CATTGCTCGT
(
3
)
1.2
0.0012
E15 cortex
CACACAAAAA
(
3
)
4.9
0.0049
P1 cortex
CACACAAAAA
(
3
)
4.5
0.0045
Hypothalamus
CGGCAGGAGG
(
4
)
7.2
0.0072
Hypothalamus
AAAGGACTAA
(
3
)
1.8
0.0018
E12.5 retina
CATTGCTCGT
(
3
)
1.9
0.0019
E14.5 retina
CGGCAGGAGG
(
4
)
1.8
0.0018
E16.5 retina
CGGCAGGAGG
(
4
)
1.8
0.0018
P2.5 retina
CACACAAAAA
(
3
)
1.8
0.0018
P2.5 retina
CATTGCTCGT
(
3
)
1.8
0.0018
P2.5 retina
CGGCAGGAGG
(
4
)
1.8
0.0018
P4.5 retina
CACACAAAAA
(
3
)
2
0.002
P4.5 retina
CATTGCTCGT
(
3
)
2
0.002
P6.5 retina
CATTGCTCGT
(
3
)
10
0.01
P10.5 crx- retina
CATTGCTCGT
(
3
)
9.3
0.0093
P10.5 crx+ retina
CACACAAAAA
(
3
)
1.9
0.0019
P10.5 crx+ retina
CATTGCTCGT
(
3
)
1.9
0.0019
P10.5 crx+ retina
CGGCAGGAGG
(
4
)
1.9
0.0019
Adult retinal
CATTGCTCGT
(
3
)
3.7
0.0037
Adult retinal
CACACAAAAA
(
3
)
1.9
0.0019
ONL
CATTGCTCGT
(
3
)
5.7
0.0057
ONL
CACACAAAAA
(
3
)
1.9
0.0019
