Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.23978
Pacsin2
protein kinase C and casein kinase substrate in neurons 2
15
23970
Mm.23978
C430045I18Rik
RIKEN cDNA C430045I18 gene
15
77656
Mm.23978
1700082O11Rik
RIKEN cDNA 1700082O11 gene
15
73510
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 25 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
Cb medulloblastoma
TAGGCATCCA
(
4
)
2.3
0.0023
P8 GC+1d culture
GCTATGAACT
(
5
)
2.3
0.0023
P8 GC+1d culture
AGAACTTACC
(
3
)
1.1
0.0011
P8 GC+1d culture
GCAAGTGCCA
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
AGAACTTACC
(
3
)
3.5
0.0035
3T3 fibroblasts
AGAACTTACC
(
3
)
3.5
0.0035
Hypothalamus
AGAACTTACC
(
3
)
3.6
0.0036
Hypothalamus
GCTATGAACT
(
5
)
1.8
0.0018
E14.5 retina
AGAACTTACC
(
3
)
5.5
0.0055
E14.5 retina
TAGGCATCCA
(
4
)
1.8
0.0018
E16.5 retina
GCAAGTGCCA
(
3
)
1.8
0.0018
E18.5 retina
AGAACTTACC
(
3
)
1.8
0.0018
P4.5 retina
AGAACTTACC
(
3
)
7.9
0.0079
P6.5 retina
AGAACTTACC
(
3
)
11.7
0.0117
P6.5 retina
CCATCTTCTG
(
3
)
1.7
0.0017
P10.5 crx- retina
AGAACTTACC
(
3
)
1.9
0.0019
P10.5 crx- retina
GCAAGTGCCA
(
3
)
1.9
0.0019
P10.5 crx+ retina
AGAACTTACC
(
3
)
3.8
0.0038
P10.5 crx+ retina
GCAAGTGCCA
(
3
)
3.8
0.0038
Adult retinal
AGAACTTACC
(
3
)
7.4
0.0074
Adult retinal
CCATCTTCTG
(
3
)
1.9
0.0019
ONL
AGAACTTACC
(
3
)
9.6
0.0096
ONL
TAGGCATCCA
(
4
)
3.8
0.0038
ONL
CCATCTTCTG
(
3
)
1.9
0.0019
ONL
GCAAGTGCCA
(
3
)
1.9
0.0019
