Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.24491
C330027C09Rik
RIKEN cDNA C330027C09 gene
16
224171
Human Homolog
KIAA1524[KIAA1524 protein]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 58 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AATACTTTTG
(
3
)
31
0.031
P8 Cb GC
TTGTAAAAAT
(
2
)
3.3
0.0033
P8 Cb GC
AGGTCCACAG
(
2
)
1.6
0.0016
P8 Cb GC
CTAGAATAGA
1.6
0.0016
P8 Cb GC
GAACTTGTTC
1.6
0.0016
P8 Cb GC
TGTCTTAACT
1.6
0.0016
Cb medulloblastoma
AGGTCCACAG
(
2
)
6.9
0.0069
Cb medulloblastoma
AATACTTTTG
(
3
)
4.6
0.0046
P8 GC+1d culture
AATACTTTTG
(
3
)
9.1
0.0091
P8 GC+1d culture
AGGTCCACAG
(
2
)
6.8
0.0068
P8 GC+SHH+1d culture
AATACTTTTG
(
3
)
9.4
0.0094
P8 GC+SHH+1d culture
AGGTCCACAG
(
2
)
9.4
0.0094
P8 GC+SHH+1d culture
CTAGAATAGA
2.3
0.0023
P8 GC+SHH+1d culture
TTGTAAAAAT
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
TGTCTTAACT
1.2
0.0012
3T3 fibroblasts
AGGTCCACAG
(
2
)
7
0.007
3T3 fibroblasts
GAACTTGTTC
3.5
0.0035
3T3 fibroblasts
TGTCTTAACT
3.5
0.0035
E15 cortex
AGGTCCACAG
(
2
)
4.9
0.0049
E15 cortex
TGTCTTAACT
4.9
0.0049
E15 cortex
TTGTAAAAAT
(
2
)
4.9
0.0049
P1 cortex
AGGTCCACAG
(
2
)
13.6
0.0136
P1 cortex
AATACTTTTG
(
3
)
9.1
0.0091
Hypothalamus
AATACTTTTG
(
3
)
3.6
0.0036
Hypothalamus
AGGTCCACAG
(
2
)
1.8
0.0018
Hypothalamus
TTGTAAAAAT
(
2
)
1.8
0.0018
E12.5 retina
AATACTTTTG
(
3
)
18.8
0.0188
E12.5 retina
AGGTCCACAG
(
2
)
5.6
0.0056
E12.5 retina
TTGTAAAAAT
(
2
)
1.9
0.0019
E14.5 retina
AATACTTTTG
(
3
)
27.3
0.0273
E14.5 retina
AGGTCCACAG
(
2
)
9.1
0.0091
E14.5 retina
TTGTAAAAAT
(
2
)
5.5
0.0055
E16.5 retina
AATACTTTTG
(
3
)
18.1
0.0181
E16.5 retina
TTGTAAAAAT
(
2
)
7.2
0.0072
E16.5 retina
AGGTCCACAG
(
2
)
3.6
0.0036
E18.5 retina
AATACTTTTG
(
3
)
14.6
0.0146
E18.5 retina
AGGTCCACAG
(
2
)
3.6
0.0036
E18.5 retina
TTGTAAAAAT
(
2
)
3.6
0.0036
E18.5 retina
CTAGAATAGA
1.8
0.0018
E18.5 retina
GAACTTGTTC
1.8
0.0018
P0.5 retina
AGGTCCACAG
(
2
)
15.7
0.0157
P0.5 retina
AATACTTTTG
(
3
)
13.7
0.0137
P2.5 retina
AATACTTTTG
(
3
)
7
0.007
P4.5 retina
AATACTTTTG
(
3
)
11.9
0.0119
P4.5 retina
AGGTCCACAG
(
2
)
5.9
0.0059
P4.5 retina
TTGTAAAAAT
(
2
)
2
0.002
P6.5 retina
AATACTTTTG
(
3
)
8.3
0.0083
P6.5 retina
AGGTCCACAG
(
2
)
5
0.005
P6.5 retina
TTGTAAAAAT
(
2
)
1.7
0.0017
P10.5 crx- retina
AATACTTTTG
(
3
)
9.3
0.0093
P10.5 crx- retina
AGGTCCACAG
(
2
)
5.6
0.0056
P10.5 crx+ retina
AGGTCCACAG
(
2
)
7.7
0.0077
P10.5 crx+ retina
AATACTTTTG
(
3
)
5.8
0.0058
Adult retinal
AGGTCCACAG
(
2
)
5.6
0.0056
Adult retinal
TTGTAAAAAT
(
2
)
5.6
0.0056
Adult retinal
AATACTTTTG
(
3
)
1.9
0.0019
ONL
AGGTCCACAG
(
2
)
15.3
0.0153
ONL
AATACTTTTG
(
3
)
3.8
0.0038
