Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.246131	Vps39	vacuolar protein sorting 39 (yeast)	2		269338
Gene Ontology	protein transport | small GTPase regulatory/interacting protein activity | transport
Human Homolog	VPS39[vacuolar protein sorting 39 (yeast)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 29 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGAGTCCTGC 4.9 0.0049 P8 Cb GC CACATACATA 1.6 0.0016 Cb medulloblastoma CACATACATA 2.3 0.0023 Cb medulloblastoma TGAGTCCTGC 2.3 0.0023 P8 GC+1d culture TGAGTCCTGC 6.8 0.0068 P8 GC+SHH+1d culture TGAGTCCTGC 4.7 0.0047 P8 GC+SHH+1d culture CACATACATA 1.2 0.0012 3T3 fibroblasts TGAGTCCTGC 3.5 0.0035 E15 cortex TGAGTCCTGC 4.9 0.0049 P1 cortex AGAAAGCTCT 9.1 0.0091 P1 cortex TGAGTCCTGC 4.5 0.0045 Hypothalamus TGAGTCCTGC 9.1 0.0091 E12.5 retina TGAGTCCTGC 3.8 0.0038 E12.5 retina CACATACATA 1.9 0.0019 E14.5 retina CACATACATA 1.8 0.0018 E16.5 retina TGAGTCCTGC 1.8 0.0018 E18.5 retina TGAGTCCTGC 3.6 0.0036 E18.5 retina AGAAAGCTCT 1.8 0.0018 P0.5 retina TGAGTCCTGC 5.9 0.0059 P0.5 retina CACATACATA 2 0.002 P2.5 retina TGAGTCCTGC 5.3 0.0053 P2.5 retina CACATACATA 1.8 0.0018 P4.5 retina TGAGTCCTGC 4 0.004 P6.5 retina TGAGTCCTGC 5 0.005 P10.5 crx- retina TGAGTCCTGC 5.6 0.0056 P10.5 crx+ retina TGAGTCCTGC 5.8 0.0058 P10.5 crx+ retina CACATACATA 1.9 0.0019 Adult retinal TGAGTCCTGC 11.1 0.0111 ONL TGAGTCCTGC 1.9 0.0019