Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.24652
AI848529
expressed sequence AI848529
6
101180
Mm.24652
2810407D09Rik
RIKEN cDNA 2810407D09 gene
6
69233
Mm.24652
3321401G04Rik
RIKEN cDNA 3321401G04 gene
6
77574
Human Homolog
KIAA0738[KIAA0738 gene product]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 53 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CACAAGGTAA
(
3
)
3.3
0.0033
P8 Cb GC
TATTATTTGG
(
3
)
3.3
0.0033
P8 Cb GC
TTGAAAGTGC
(
3
)
1.6
0.0016
Cb medulloblastoma
TATTATTTGG
(
3
)
6.9
0.0069
Cb medulloblastoma
GGCCAGCACA
(
5
)
2.3
0.0023
P8 GC+1d culture
TATTATTTGG
(
3
)
13.7
0.0137
P8 GC+1d culture
GCGGTCCATT
(
3
)
2.3
0.0023
P8 GC+1d culture
TTATGTAAAG
(
3
)
2.3
0.0023
P8 GC+1d culture
CACAAGGTAA
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
GCGGTCCATT
(
3
)
5.9
0.0059
P8 GC+SHH+1d culture
TATTATTTGG
(
3
)
5.9
0.0059
P8 GC+SHH+1d culture
GCATTGGGAG
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
GGCCAGCACA
(
5
)
1.2
0.0012
3T3 fibroblasts
GCGGTCCATT
(
3
)
3.5
0.0035
3T3 fibroblasts
GGCCAGCACA
(
5
)
3.5
0.0035
E15 cortex
GCGGTCCATT
(
3
)
19.8
0.0198
E15 cortex
TTGAAAGTGC
(
3
)
4.9
0.0049
P1 cortex
TTGAAAGTGC
(
3
)
13.6
0.0136
P1 cortex
TATTATTTGG
(
3
)
4.5
0.0045
Hypothalamus
TATTATTTGG
(
3
)
7.2
0.0072
Hypothalamus
GCGGTCCATT
(
3
)
1.8
0.0018
E12.5 retina
TATTATTTGG
(
3
)
7.5
0.0075
E14.5 retina
TATTATTTGG
(
3
)
5.5
0.0055
E14.5 retina
GCGGTCCATT
(
3
)
3.6
0.0036
E14.5 retina
TTGTCCTCTG
(
5
)
3.6
0.0036
E14.5 retina
GCATTGGGAG
(
3
)
1.8
0.0018
E14.5 retina
TTTCCCGATC
(
3
)
1.8
0.0018
E16.5 retina
GCGGTCCATT
(
3
)
3.6
0.0036
E16.5 retina
TTATGTAAAG
(
3
)
1.8
0.0018
E16.5 retina
TTGTCCTCTG
(
5
)
1.8
0.0018
E18.5 retina
TATTATTTGG
(
3
)
12.7
0.0127
E18.5 retina
GCATTGGGAG
(
3
)
1.8
0.0018
P0.5 retina
GCGGTCCATT
(
3
)
5.9
0.0059
P0.5 retina
TATTATTTGG
(
3
)
3.9
0.0039
P0.5 retina
CACAAGGTAA
(
3
)
2
0.002
P0.5 retina
TTGAAAGTGC
(
3
)
2
0.002
P0.5 retina
TTTCCCGATC
(
3
)
2
0.002
P2.5 retina
TATTATTTGG
(
3
)
8.8
0.0088
P2.5 retina
GCGGTCCATT
(
3
)
3.5
0.0035
P2.5 retina
CACAAGGTAA
(
3
)
1.8
0.0018
P4.5 retina
TATTATTTGG
(
3
)
9.9
0.0099
P4.5 retina
CACAAGGTAA
(
3
)
4
0.004
P4.5 retina
GCGGTCCATT
(
3
)
2
0.002
P6.5 retina
TATTATTTGG
(
3
)
3.3
0.0033
P6.5 retina
GCGGTCCATT
(
3
)
1.7
0.0017
P10.5 crx- retina
GCGGTCCATT
(
3
)
7.4
0.0074
P10.5 crx- retina
TTTCCCGATC
(
3
)
1.9
0.0019
P10.5 crx+ retina
TATTATTTGG
(
3
)
1.9
0.0019
P10.5 crx+ retina
TTATGTAAAG
(
3
)
1.9
0.0019
Adult retinal
GGCCAGCACA
(
5
)
3.7
0.0037
Adult retinal
GCGGTCCATT
(
3
)
1.9
0.0019
ONL
GCGGTCCATT
(
3
)
3.8
0.0038
ONL
GCATTGGGAG
(
3
)
1.9
0.0019
