Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.247352
Slc6a6
solute carrier family 6 (neurotransmitter transporter, taurine), member 6
6
6 D1 (6 38.2 cM)
21366
Mm.247352
4930517G19Rik
RIKEN cDNA 4930517G19 gene
6
74727
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 41 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TATTTTGTGG
(
2
)
3.3
0.0033
P8 Cb GC
GAAATCAATA
(
2
)
1.6
0.0016
P8 Cb GC
TGACAGGCGC
(
2
)
1.6
0.0016
Cb medulloblastoma
TATTTTGTGG
(
2
)
4.6
0.0046
Cb medulloblastoma
TGACAGGCGC
(
2
)
2.3
0.0023
P8 GC+1d culture
TATTTTGTGG
(
2
)
1.1
0.0011
P8 GC+1d culture
TGACAGGCGC
(
2
)
1.1
0.0011
P8 GC+1d culture
TTCCCTGAAG
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
TTCCCTGAAG
(
2
)
1.2
0.0012
3T3 fibroblasts
TTCCCTGAAG
(
2
)
7
0.007
P1 cortex
TATTTTGTGG
(
2
)
13.6
0.0136
E12.5 retina
GAAATCAATA
(
2
)
3.8
0.0038
E12.5 retina
TATTTTGTGG
(
2
)
1.9
0.0019
E14.5 retina
TTCCCTGAAG
(
2
)
1.8
0.0018
P0.5 retina
TGACAGGCGC
(
2
)
2
0.002
P0.5 retina
TTCCCTGAAG
(
2
)
2
0.002
P2.5 retina
TTCCCTGAAG
(
2
)
3.5
0.0035
P2.5 retina
GAAATCAATA
(
2
)
1.8
0.0018
P2.5 retina
TGACAGGCGC
(
2
)
1.8
0.0018
P4.5 retina
GAAATCAATA
(
2
)
2
0.002
P4.5 retina
GCACAAGAGC
(
2
)
2
0.002
P4.5 retina
TGACAGGCGC
(
2
)
2
0.002
P6.5 retina
TTCCCTGAAG
(
2
)
3.3
0.0033
P6.5 retina
GCACAAGAGC
(
2
)
1.7
0.0017
P6.5 retina
TGACAGGCGC
(
2
)
1.7
0.0017
P10.5 crx- retina
TTCCCTGAAG
(
2
)
3.7
0.0037
P10.5 crx+ retina
TGACAGGCGC
(
2
)
7.7
0.0077
P10.5 crx+ retina
TTCCCTGAAG
(
2
)
3.8
0.0038
P10.5 crx+ retina
GAAATCAATA
(
2
)
1.9
0.0019
P10.5 crx+ retina
TATTTTGTGG
(
2
)
1.9
0.0019
Adult retinal
TTCCCTGAAG
(
2
)
48.1
0.0481
Adult retinal
TATTTTGTGG
(
2
)
11.1
0.0111
Adult retinal
TGACAGGCGC
(
2
)
5.6
0.0056
Adult retinal
GAAATCAATA
(
2
)
1.9
0.0019
Adult retinal
GCACAAGAGC
(
2
)
1.9
0.0019
Adult retinal
TATACATTGG
(
2
)
1.9
0.0019
ONL
TTCCCTGAAG
(
2
)
32.6
0.0326
ONL
TATTTTGTGG
(
2
)
13.4
0.0134
ONL
TGACAGGCGC
(
2
)
9.6
0.0096
ONL
GCACAAGAGC
(
2
)
5.7
0.0057
ONL
TATACATTGG
(
2
)
5.7
0.0057
