Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.247456	Tex42	testis expressed gene 42			21774
Mm.247456	Nfx1	nuclear transcription factor, X-box binding 1	4	4 19.9 cM	74164
Gene Ontology	negative regulation of MHC class II biosynthesis | negative regulation of transcription from Pol II promoter
Human Homolog	NFX1[nuclear transcription factor, X-box binding 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 21 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CGCCACTACC (2) 1.6 0.0016 P8 Cb GC TTCTCATTGT (2) 1.6 0.0016 P8 GC+1d culture GCGGAAAGCA (2) 2.3 0.0023 P8 GC+1d culture CGCCACTACC (2) 1.1 0.0011 P8 GC+1d culture TGTTTGAAGA (2) 1.1 0.0011 Hypothalamus CGCCACTACC (2) 3.6 0.0036 Hypothalamus TGTTTGAAGA (2) 1.8 0.0018 E12.5 retina TGTTTGAAGA (2) 3.8 0.0038 E12.5 retina GCGGAAAGCA (2) 1.9 0.0019 E16.5 retina CGCCACTACC (2) 1.8 0.0018 E16.5 retina TTCTCATTGT (2) 1.8 0.0018 E18.5 retina CGCCACTACC (2) 1.8 0.0018 P4.5 retina CGCCACTACC (2) 4 0.004 P6.5 retina CGCCACTACC (2) 3.3 0.0033 P6.5 retina TGTTTGAAGA (2) 3.3 0.0033 P10.5 crx- retina CGCCACTACC (2) 3.7 0.0037 P10.5 crx+ retina TGTTTGAAGA (2) 3.8 0.0038 P10.5 crx+ retina CGCCACTACC (2) 1.9 0.0019 P10.5 crx+ retina GCGGAAAGCA (2) 1.9 0.0019 Adult retinal CGCCACTACC (2) 1.9 0.0019 ONL TTCTCATTGT (2) 1.9 0.0019