Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.247542	Prdx4	peroxiredoxin 4	X	X 67.7 cM	53381
Gene Ontology	antioxidant activity | biological_process unknown | extracellular space | mitochondrion | oxidoreductase activity | peroxidase activity
Human Homolog	PRDX4[peroxiredoxin 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 41 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGAAGTCTG 24.5 0.0245 P8 Cb GC CTACCACTTC 4.9 0.0049 P8 Cb GC GAGAATTTTC (2) 4.9 0.0049 P8 Cb GC CTTGTCAGTG 1.6 0.0016 Cb medulloblastoma GAGAAGTCTG 9.2 0.0092 Cb medulloblastoma GAGAATTTTC (2) 2.3 0.0023 P8 GC+1d culture GAGAAGTCTG 9.1 0.0091 P8 GC+1d culture GAGAATTTTC (2) 4.6 0.0046 P8 GC+SHH+1d culture GAGAAGTCTG 23.4 0.0234 P8 GC+SHH+1d culture CCTTTAGTTT (3) 2.3 0.0023 P8 GC+SHH+1d culture CTACCACTTC 1.2 0.0012 3T3 fibroblasts GAGAAGTCTG 10.5 0.0105 E15 cortex GAGAATTTTC (2) 4.9 0.0049 Hypothalamus GAGAAGTCTG 5.4 0.0054 Hypothalamus GAGAATTTTC (2) 3.6 0.0036 E12.5 retina CTACCACTTC 7.5 0.0075 E12.5 retina GAGAAGTCTG 7.5 0.0075 E14.5 retina GAGAAGTCTG 9.1 0.0091 E14.5 retina CTACCACTTC 3.6 0.0036 E16.5 retina GAGAAGTCTG 30.8 0.0308 E16.5 retina CTACCACTTC 1.8 0.0018 E18.5 retina GAGAAGTCTG 12.7 0.0127 E18.5 retina GAGAATTTTC (2) 5.5 0.0055 P0.5 retina GAGAAGTCTG 13.7 0.0137 P0.5 retina GAGAAGTTTG (2) 2 0.002 P0.5 retina GAGAATTTTC (2) 2 0.002 P2.5 retina GAGAAGTCTG 14.1 0.0141 P2.5 retina CCTTTAGTTT (3) 1.8 0.0018 P4.5 retina GAGAAGTCTG 4 0.004 P4.5 retina CCTTTAGTTT (3) 2 0.002 P4.5 retina CTTGTCAGTG 2 0.002 P6.5 retina GAGAAGTCTG 5 0.005 P6.5 retina GAGAATTTTC (2) 1.7 0.0017 P10.5 crx- retina GAGAAGTCTG 5.6 0.0056 P10.5 crx- retina CCTTTAGTTT (3) 1.9 0.0019 P10.5 crx+ retina GAGAAGTCTG 1.9 0.0019 P10.5 crx+ retina GAGAATTTTC (2) 1.9 0.0019 Adult retinal CTTGTCAGTG 1.9 0.0019 Adult retinal GAGAAGTCTG 1.9 0.0019 Adult retinal GAGAAGTTTG (2) 1.9 0.0019 Adult retinal GAGAATTTTC (2) 1.9 0.0019