Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.24765
Rnf20
ring finger protein 20
4
4 B1
109331
Human Homolog
RNF20[ring finger protein 20]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 11 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 30 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGCTTCAATT
(
3
)
4.9
0.0049
P8 Cb GC
TGTATATAAT
(
2
)
1.6
0.0016
Cb medulloblastoma
TGCTTCAATT
(
3
)
2.3
0.0023
P8 GC+1d culture
TGCTTCAATT
(
3
)
8
0.008
P8 GC+SHH+1d culture
TGCTTCAATT
(
3
)
10.5
0.0105
P8 GC+SHH+1d culture
TGTATATAAT
(
2
)
1.2
0.0012
3T3 fibroblasts
GCACCCGGGG
7
0.007
E15 cortex
GCACCCGGGG
4.9
0.0049
E15 cortex
TGCTTCAATT
(
3
)
4.9
0.0049
P1 cortex
TGCTTCAATT
(
3
)
4.5
0.0045
P1 cortex
TGTATATAAT
(
2
)
4.5
0.0045
Hypothalamus
TGCTTCAATT
(
3
)
7.2
0.0072
E12.5 retina
TGCTTCAATT
(
3
)
9.4
0.0094
E14.5 retina
TGCTTCAATT
(
3
)
5.5
0.0055
E14.5 retina
TGTATATAAT
(
2
)
5.5
0.0055
E16.5 retina
TGCTTCAATT
(
3
)
9.1
0.0091
E16.5 retina
TGTATATAAT
(
2
)
5.4
0.0054
E18.5 retina
TGCTTCAATT
(
3
)
20
0.02
E18.5 retina
TGTATATAAT
(
2
)
3.6
0.0036
P0.5 retina
TGCTTCAATT
(
3
)
5.9
0.0059
P0.5 retina
GCACCCGGGG
2
0.002
P2.5 retina
TGCTTCAATT
(
3
)
22.9
0.0229
P2.5 retina
TGTATATAAT
(
2
)
1.8
0.0018
P4.5 retina
TGCTTCAATT
(
3
)
11.9
0.0119
P4.5 retina
TGTATATAAT
(
2
)
2
0.002
P6.5 retina
TGCTTCAATT
(
3
)
10
0.01
P10.5 crx+ retina
TGCTTCAATT
(
3
)
9.6
0.0096
P10.5 crx+ retina
TGTATATAAT
(
2
)
3.8
0.0038
Adult retinal
TGCTTCAATT
(
3
)
3.7
0.0037
ONL
TGCTTCAATT
(
3
)
9.6
0.0096
