Mouse Retina SAGE Library
[
Home
] [
Libraries
] [
Images
]
Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.25203
Nckap1
NCK-associated protein 1
2
2 48.0 cM
50884
Mm.25203
AW822080
expressed sequence AW822080
2
99433
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 46 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTGCCGCCGC
(
3
)
6.5
0.0065
P8 Cb GC
CTGTTGTATT
(
4
)
3.3
0.0033
P8 Cb GC
CCGACGCCCC
(
2
)
1.6
0.0016
Cb medulloblastoma
CTGCCGCCGC
(
3
)
11.6
0.0116
Cb medulloblastoma
GCAGACAACT
(
2
)
4.6
0.0046
Cb medulloblastoma
ACCTCCCTAA
(
2
)
2.3
0.0023
P8 GC+1d culture
CTGCCGCCGC
(
3
)
16
0.016
P8 GC+1d culture
CCGACGCCCC
(
2
)
4.6
0.0046
P8 GC+1d culture
CTGTTGTATT
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
CCGACGCCCC
(
2
)
8.2
0.0082
P8 GC+SHH+1d culture
CTGCCGCCGC
(
3
)
8.2
0.0082
P8 GC+SHH+1d culture
CTGTTGTATT
(
4
)
2.3
0.0023
3T3 fibroblasts
CTGCCGCCGC
(
3
)
31.5
0.0315
3T3 fibroblasts
CCGACGCCCC
(
2
)
3.5
0.0035
E15 cortex
CTGCCGCCGC
(
3
)
39.6
0.0396
P1 cortex
CTGCCGCCGC
(
3
)
27.3
0.0273
Hypothalamus
CCGACGCCCC
(
2
)
7.2
0.0072
Hypothalamus
CTGCCGCCGC
(
3
)
7.2
0.0072
Hypothalamus
GCAGACAACT
(
2
)
3.6
0.0036
E12.5 retina
CTGCCGCCGC
(
3
)
5.6
0.0056
E12.5 retina
CCGACGCCCC
(
2
)
1.9
0.0019
E14.5 retina
CCGACGCCCC
(
2
)
9.1
0.0091
E14.5 retina
CTGCCGCCGC
(
3
)
3.6
0.0036
E14.5 retina
GCAGACAACT
(
2
)
3.6
0.0036
E16.5 retina
CCGACGCCCC
(
2
)
14.5
0.0145
E18.5 retina
CCGACGCCCC
(
2
)
1.8
0.0018
E18.5 retina
CTGCCGCCGC
(
3
)
1.8
0.0018
P0.5 retina
CTGCCGCCGC
(
3
)
15.7
0.0157
P0.5 retina
CCGACGCCCC
(
2
)
3.9
0.0039
P0.5 retina
CTGTTGTATT
(
4
)
2
0.002
P2.5 retina
CTGCCGCCGC
(
3
)
5.3
0.0053
P2.5 retina
CCGACGCCCC
(
2
)
3.5
0.0035
P4.5 retina
CCGACGCCCC
(
2
)
13.9
0.0139
P4.5 retina
CTGCCGCCGC
(
3
)
2
0.002
P6.5 retina
CCGACGCCCC
(
2
)
5
0.005
P6.5 retina
CTGCCGCCGC
(
3
)
5
0.005
P10.5 crx- retina
CCGACGCCCC
(
2
)
5.6
0.0056
P10.5 crx- retina
CTGCCGCCGC
(
3
)
5.6
0.0056
P10.5 crx+ retina
CTGCCGCCGC
(
3
)
13.5
0.0135
P10.5 crx+ retina
GCAGACAACT
(
2
)
1.9
0.0019
Adult retinal
CTGCCGCCGC
(
3
)
11.1
0.0111
Adult retinal
ACCTCCCTAA
(
2
)
1.9
0.0019
Adult retinal
CCGACGCCCC
(
2
)
1.9
0.0019
ONL
CTGCCGCCGC
(
3
)
9.6
0.0096
ONL
ACCTCCCTAA
(
2
)
1.9
0.0019
ONL
CCGACGCCCC
(
2
)
1.9
0.0019
