Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.257437	3100003M19Rik	RIKEN cDNA 3100003M19 gene	18		73082
Mm.257437	9430011C21Rik	RIKEN cDNA 9430011C21 gene	18		319791
Mm.257437	Cdh2	cadherin 2	18	18 6.0 cM	12558
Gene Ontology	adherens junction | calcium ion binding | cell adhesion | extracellular space | homophilic cell adhesion | integral to membrane | lamellipodium | membrane | protein binding | synapse
Human Homolog	CDH2[cadherin 2, type 1, N-cadherin (neuronal)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 45 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGTGATTTT (3) 3.3 0.0033 P8 Cb GC TACGGCGGTG (3) 3.3 0.0033 P8 Cb GC TTAATATCTT (3) 3.3 0.0033 P8 Cb GC TTCCGAGTTC (3) 1.6 0.0016 P8 GC+1d culture TTAATATCTT (3) 8 0.008 P8 GC+1d culture TTCCGAGTTC (3) 6.8 0.0068 P8 GC+1d culture TACGGCGGTG (3) 4.6 0.0046 P8 GC+1d culture GAGTGATTTT (3) 2.3 0.0023 P8 GC+SHH+1d culture TTAATATCTT (3) 7 0.007 P8 GC+SHH+1d culture GAGTGATTTT (3) 2.3 0.0023 P8 GC+SHH+1d culture TACGGCGGTG (3) 1.2 0.0012 P8 GC+SHH+1d culture TTCCGAGTTC (3) 1.2 0.0012 3T3 fibroblasts TACGGCGGTG (3) 3.5 0.0035 P1 cortex TTCCGAGTTC (3) 4.5 0.0045 Hypothalamus TTCCGAGTTC (3) 3.6 0.0036 E12.5 retina TTCCGAGTTC (3) 7.5 0.0075 E12.5 retina TTAATATCTT (3) 3.8 0.0038 E14.5 retina GAGTGATTTT (3) 1.8 0.0018 E14.5 retina TTAATATCTT (3) 1.8 0.0018 E14.5 retina TTCCGAGTTC (3) 1.8 0.0018 E16.5 retina GAGTGATTTT (3) 5.4 0.0054 E16.5 retina TTAATATCTT (3) 5.4 0.0054 E16.5 retina TTCCGAGTTC (3) 3.6 0.0036 E18.5 retina GAGTGATTTT (3) 1.8 0.0018 E18.5 retina TACGGCGGTG (3) 1.8 0.0018 E18.5 retina TTCCGAGTTC (3) 1.8 0.0018 P0.5 retina TACGGCGGTG (3) 9.8 0.0098 P0.5 retina TTCCGAGTTC (3) 3.9 0.0039 P0.5 retina GAGTGATTTT (3) 2 0.002 P0.5 retina TTAATATCTT (3) 2 0.002 P2.5 retina TTAATATCTT (3) 5.3 0.0053 P2.5 retina GAGTGATTTT (3) 3.5 0.0035 P2.5 retina TTCCGAGTTC (3) 1.8 0.0018 P4.5 retina TTAATATCTT (3) 9.9 0.0099 P4.5 retina GAGTGATTTT (3) 4 0.004 P4.5 retina TTCCGAGTTC (3) 2 0.002 P6.5 retina TACGGCGGTG (3) 3.3 0.0033 P6.5 retina TTCCGAGTTC (3) 3.3 0.0033 P6.5 retina TTAATATCTT (3) 1.7 0.0017 P10.5 crx- retina TTAATATCTT (3) 1.9 0.0019 P10.5 crx+ retina TTCCGAGTTC (3) 3.8 0.0038 P10.5 crx+ retina GAGTGATTTT (3) 1.9 0.0019 P10.5 crx+ retina TACGGCGGTG (3) 1.9 0.0019 Adult retinal TACGGCGGTG (3) 1.9 0.0019 Adult retinal TTCCGAGTTC (3) 1.9 0.0019