Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.260288
Ppp2ca
protein phosphatase 2a, catalytic subunit, alpha isoform
11
19052
Mm.260288
R75353
expressed sequence R75353
11
97777
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 70 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ACTGTAGATG
(
2
)
13.1
0.0131
P8 Cb GC
AGGATGCTTG
(
2
)
4.9
0.0049
P8 Cb GC
ACCGGAACGT
(
2
)
1.6
0.0016
P8 Cb GC
ACTGGAGATG
(
2
)
1.6
0.0016
P8 Cb GC
AGGGTCCAAT
(
2
)
1.6
0.0016
P8 Cb GC
CTGAGTAAGC
(
4
)
1.6
0.0016
P8 Cb GC
TCACTCGTCG
(
2
)
1.6
0.0016
Cb medulloblastoma
AGGATGCTTG
(
2
)
6.9
0.0069
Cb medulloblastoma
AGGGTCCAAT
(
2
)
4.6
0.0046
Cb medulloblastoma
ACTGTAGATG
(
2
)
2.3
0.0023
P8 GC+1d culture
ACTGTAGATG
(
2
)
10.3
0.0103
P8 GC+1d culture
AGGATGCTTG
(
2
)
5.7
0.0057
P8 GC+1d culture
CTGACGCGAC
(
2
)
1.1
0.0011
P8 GC+1d culture
CTGAGTAAGC
(
4
)
1.1
0.0011
P8 GC+1d culture
TTTTCAGGTA
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
AGGATGCTTG
(
2
)
10.5
0.0105
P8 GC+SHH+1d culture
ACTGTAGATG
(
2
)
9.4
0.0094
P8 GC+SHH+1d culture
ACTGGAGATG
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
ACTTTTCATC
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
CTGACGCGAC
(
2
)
1.2
0.0012
3T3 fibroblasts
ACTGTAGATG
(
2
)
3.5
0.0035
E15 cortex
ACATTAGATG
(
4
)
4.9
0.0049
E15 cortex
ACTGTAGATG
(
2
)
4.9
0.0049
P1 cortex
ACTGTAGATG
(
2
)
22.7
0.0227
P1 cortex
AGGATGCTTG
(
2
)
9.1
0.0091
P1 cortex
ACTTTTCATC
(
2
)
4.5
0.0045
Hypothalamus
AGGATGCTTG
(
2
)
3.6
0.0036
Hypothalamus
TCACTCGTCG
(
2
)
3.6
0.0036
Hypothalamus
ACATTAGATG
(
4
)
1.8
0.0018
Hypothalamus
ACTGTAGATG
(
2
)
1.8
0.0018
Hypothalamus
TTTGCCCAGA
(
3
)
1.8
0.0018
E12.5 retina
AGGATGCTTG
(
2
)
9.4
0.0094
E12.5 retina
ACTGTAGATG
(
2
)
3.8
0.0038
E12.5 retina
ACTGGAGATG
(
2
)
1.9
0.0019
E12.5 retina
ACTTTTCATC
(
2
)
1.9
0.0019
E14.5 retina
AGGATGCTTG
(
2
)
7.3
0.0073
E14.5 retina
ACTGTAGATG
(
2
)
3.6
0.0036
E14.5 retina
ACATTAGATG
(
4
)
1.8
0.0018
E14.5 retina
ACCGGAACGT
(
2
)
1.8
0.0018
E14.5 retina
ACTTTTCATC
(
2
)
1.8
0.0018
E14.5 retina
CTGAGTAAGC
(
4
)
1.8
0.0018
E16.5 retina
ACTGTAGATG
(
2
)
12.7
0.0127
E16.5 retina
ACATTAGATG
(
4
)
1.8
0.0018
E16.5 retina
AGGATGCTTG
(
2
)
1.8
0.0018
E18.5 retina
ACTGGAGATG
(
2
)
1.8
0.0018
E18.5 retina
AGGATGCTTG
(
2
)
1.8
0.0018
P0.5 retina
ACTGTAGATG
(
2
)
11.8
0.0118
P0.5 retina
AGGATGCTTG
(
2
)
3.9
0.0039
P0.5 retina
ACCGGAACGT
(
2
)
2
0.002
P2.5 retina
ACTGTAGATG
(
2
)
7
0.007
P2.5 retina
AGGATGCTTG
(
2
)
7
0.007
P4.5 retina
AGGATGCTTG
(
2
)
7.9
0.0079
P4.5 retina
CTGACGCGAC
(
2
)
2
0.002
P6.5 retina
AGGATGCTTG
(
2
)
10
0.01
P6.5 retina
ACTGTAGATG
(
2
)
5
0.005
P6.5 retina
TTTGCCCAGA
(
3
)
1.7
0.0017
P10.5 crx- retina
ACTGTAGATG
(
2
)
16.7
0.0167
P10.5 crx- retina
AGGATGCTTG
(
2
)
11.1
0.0111
P10.5 crx- retina
ACTGGAGATG
(
2
)
3.7
0.0037
P10.5 crx- retina
CTGAGTAAGC
(
4
)
1.9
0.0019
P10.5 crx- retina
TTTTCAGGTA
(
2
)
1.9
0.0019
P10.5 crx+ retina
ACTGTAGATG
(
2
)
9.6
0.0096
P10.5 crx+ retina
AGGATGCTTG
(
2
)
9.6
0.0096
P10.5 crx+ retina
ACCGGAACGT
(
2
)
1.9
0.0019
P10.5 crx+ retina
ACTTTTCATC
(
2
)
1.9
0.0019
P10.5 crx+ retina
TTTGCCCAGA
(
3
)
1.9
0.0019
Adult retinal
ACTGTAGATG
(
2
)
11.1
0.0111
Adult retinal
AGGATGCTTG
(
2
)
7.4
0.0074
ONL
ACTGTAGATG
(
2
)
5.7
0.0057
ONL
CTGAGTAAGC
(
4
)
1.9
0.0019
