Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.261681
2010107H07Rik
RIKEN cDNA 2010107H07 gene
14
66487
Mm.261681
B930019K04Rik
RIKEN cDNA B930019K04 gene
14
320094
Mm.261681
2510015F01Rik
RIKEN cDNA 2510015F01 gene
14
70021
Human Homolog
FLJ12442[hypothetical protein FLJ12442]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 26 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCCCACATCC
(
4
)
42.4
0.0424
Cb medulloblastoma
GCCCACATCC
(
4
)
4.6
0.0046
P8 GC+1d culture
GCCCACATCC
(
4
)
87.9
0.0879
P8 GC+1d culture
GCCTCACTCA
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
GCCCACATCC
(
4
)
56.2
0.0562
3T3 fibroblasts
GCCCACATCC
(
4
)
7
0.007
E15 cortex
GCCCACATCC
(
4
)
14.8
0.0148
E12.5 retina
GCCCACATCC
(
4
)
35.7
0.0357
E12.5 retina
AGATCCGCCA
(
3
)
1.9
0.0019
E14.5 retina
GCCCACATCC
(
4
)
56.5
0.0565
E14.5 retina
TAGAGGTCGG
(
3
)
1.8
0.0018
E16.5 retina
GCCCACATCC
(
4
)
74.3
0.0743
E16.5 retina
TAGAGGTCGG
(
3
)
3.6
0.0036
E16.5 retina
AGATCCGCCA
(
3
)
1.8
0.0018
E16.5 retina
GCCTCACTCA
(
3
)
1.8
0.0018
E18.5 retina
GCCCACATCC
(
4
)
23.6
0.0236
P0.5 retina
GCCCACATCC
(
4
)
39.3
0.0393
P0.5 retina
AGATCCGCCA
(
3
)
3.9
0.0039
P2.5 retina
GCCCACATCC
(
4
)
28.2
0.0282
P4.5 retina
GCCCACATCC
(
4
)
31.7
0.0317
P4.5 retina
GCCTCACTCA
(
3
)
2
0.002
P6.5 retina
GCCCACATCC
(
4
)
10
0.01
P10.5 crx- retina
GCCCACATCC
(
4
)
7.4
0.0074
P10.5 crx+ retina
GCCCACATCC
(
4
)
11.5
0.0115
Adult retinal
GCCCACATCC
(
4
)
1.9
0.0019
ONL
GCCCACATCC
(
4
)
1.9
0.0019
