Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.262327	Vdac2	voltage-dependent anion channel 2	14	14 2.5 cM	22334
Gene Ontology	anion transport | integral to membrane | mitochondrial outer membrane | mitochondrion | outer membrane | porin activity | voltage-dependent anion channel porin activity | voltage-dependent ion-selective channel activity
Human Homolog	VDAC2[voltage-dependent anion channel 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 60 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CGACCAGCAG 11.4 0.0114 P8 Cb GC ACAAATTATG (2) 3.3 0.0033 P8 Cb GC CAGCGGTGTG 1.6 0.0016 Cb medulloblastoma ACAAATTATG (2) 11.6 0.0116 Cb medulloblastoma CGACCAGCAG 9.2 0.0092 Cb medulloblastoma GGTCAGCTGT 4.6 0.0046 Cb medulloblastoma TTTGTTTTAT (2) 4.6 0.0046 Cb medulloblastoma GCACGGTTTT 2.3 0.0023 P8 GC+1d culture CGACCAGCAG 12.6 0.0126 P8 GC+1d culture ACAAATTATG (2) 8 0.008 P8 GC+1d culture GAAATATATT (2) 1.1 0.0011 P8 GC+1d culture GGTCAGCTGT 1.1 0.0011 P8 GC+SHH+1d culture CGACCAGCAG 15.2 0.0152 P8 GC+SHH+1d culture ACAAATTATG (2) 10.5 0.0105 P8 GC+SHH+1d culture TTTGTTTTAT (2) 1.2 0.0012 3T3 fibroblasts CGACCAGCAG 35 0.035 3T3 fibroblasts CAGCGGTGTG 3.5 0.0035 E15 cortex CGACCAGCAG 4.9 0.0049 P1 cortex ACAAATTATG (2) 4.5 0.0045 P1 cortex CGACCAGCAG 4.5 0.0045 Hypothalamus ACAAATTATG (2) 9.1 0.0091 Hypothalamus CGACCAGCAG 9.1 0.0091 Hypothalamus GAAATATATA (2) 1.8 0.0018 Hypothalamus TTTGTTTTAT (2) 1.8 0.0018 E12.5 retina CGACCAGCAG 11.3 0.0113 E12.5 retina ACAAATTATG (2) 9.4 0.0094 E14.5 retina ACAAATTATG (2) 9.1 0.0091 E14.5 retina CGACCAGCAG 5.5 0.0055 E14.5 retina GCACGGTTTT 1.8 0.0018 E14.5 retina TTTGTTTTAT (2) 1.8 0.0018 E16.5 retina CGACCAGCAG 18.1 0.0181 E16.5 retina ACAAATTATG (2) 3.6 0.0036 E16.5 retina CAGCGGTGTG 1.8 0.0018 E16.5 retina GAAATATATA (2) 1.8 0.0018 E16.5 retina GCACGGTTTT 1.8 0.0018 E16.5 retina TTTGTTTTAT (2) 1.8 0.0018 E18.5 retina ACAAATTATG (2) 12.7 0.0127 E18.5 retina CGACCAGCAG 10.9 0.0109 E18.5 retina TTTGTTTTAT (2) 3.6 0.0036 E18.5 retina GAAATATATT (2) 1.8 0.0018 P0.5 retina CGACCAGCAG 23.6 0.0236 P0.5 retina ACAAATTATG (2) 11.8 0.0118 P2.5 retina CGACCAGCAG 15.8 0.0158 P2.5 retina ACAAATTATG (2) 1.8 0.0018 P4.5 retina CGACCAGCAG 17.8 0.0178 P4.5 retina ACAAATTATG (2) 7.9 0.0079 P6.5 retina CGACCAGCAG 11.7 0.0117 P6.5 retina ACAAATTATG (2) 8.3 0.0083 P10.5 crx- retina ACAAATTATG (2) 7.4 0.0074 P10.5 crx- retina CGACCAGCAG 7.4 0.0074 P10.5 crx- retina GAAATATATT (2) 1.9 0.0019 P10.5 crx+ retina CGACCAGCAG 15.4 0.0154 P10.5 crx+ retina ACAAATTATG (2) 7.7 0.0077 P10.5 crx+ retina CAGCGGTGTG 1.9 0.0019 P10.5 crx+ retina TTTGTTTTAT (2) 1.9 0.0019 Adult retinal CGACCAGCAG 27.8 0.0278 Adult retinal ACAAATTATG (2) 5.6 0.0056 ONL CGACCAGCAG 9.6 0.0096 ONL ACAAATTATG (2) 5.7 0.0057 ONL GGTCAGCTGT 1.9 0.0019