Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.267116	AW743275	expressed sequence AW743275	12		105052
Mm.267116	9530091C08Rik	RIKEN cDNA 9530091C08 gene	9		320440
Mm.267116	Rora	RAR-related orphan receptor alpha	9	9 36.0 cM	19883
Gene Ontology	DNA binding | ligand-dependent nuclear receptor activity | nucleus | receptor activity | regulation of transcription, DNA-dependent | steroid hormone receptor activity | transcription factor activity
Human Homolog	RORA[RAR-related orphan receptor A]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 26 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCGGCAGAGT (3) 1.6 0.0016 Cb medulloblastoma TACACCAGAA (4) 2.3 0.0023 Cb medulloblastoma TGTGCATTTT (5) 2.3 0.0023 P8 GC+1d culture CCGGCAGAGT (3) 2.3 0.0023 P8 GC+1d culture TGTGCATTTT (5) 1.1 0.0011 E12.5 retina CCGGCAGAGT (3) 3.8 0.0038 E12.5 retina TGTGCATTTT (5) 3.8 0.0038 E14.5 retina TACCCCAGAA (3) 3.6 0.0036 E14.5 retina TACACCAGAA (4) 1.8 0.0018 E14.5 retina TCTTTCCAGT (3) 1.8 0.0018 E16.5 retina CCGGCAGAGT (3) 1.8 0.0018 E18.5 retina TACCCCAGAA (3) 1.8 0.0018 P2.5 retina TGTGCATTTT (5) 3.5 0.0035 P2.5 retina TCTTTCCAGT (3) 1.8 0.0018 P4.5 retina TGTGCATTTT (5) 4 0.004 P4.5 retina CCGGCAGAGT (3) 2 0.002 P4.5 retina TACACCAGAA (4) 2 0.002 P4.5 retina TCTTTCCAGT (3) 2 0.002 P6.5 retina TGTGCATTTT (5) 3.3 0.0033 P10.5 crx+ retina TGTGCATTTT (5) 3.8 0.0038 Adult retinal CCGGCAGAGT (3) 1.9 0.0019 Adult retinal TACACCAGAA (4) 1.9 0.0019 Adult retinal TCTTTCCAGT (3) 1.9 0.0019 ONL TGTGCATTTT (5) 5.7 0.0057 ONL TACACCAGAA (4) 3.8 0.0038 ONL TCTTTCCAGT (3) 3.8 0.0038