Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.268000	Vim	vimentin	2	2 7.0 cM	22352
Gene Ontology	intermediate filament | intermediate filament-based process | structural molecule activity | type III intermediate filament
Human Homolog	VIM[vimentin]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 48 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGCAGCCCCC (2) 21.2 0.0212 P8 Cb GC AAGGAAGAGA (2) 3.3 0.0033 P8 Cb GC TTTTGGATCT 1.6 0.0016 Cb medulloblastoma GGCAGCCCCC (2) 6.9 0.0069 Cb medulloblastoma AAGGAAGAGA (2) 2.3 0.0023 Cb medulloblastoma TCCAGATCGA 2.3 0.0023 P8 GC+1d culture GGCAGCCCCC (2) 40 0.04 P8 GC+1d culture AAGGAAGAGA (2) 27.4 0.0274 P8 GC+1d culture TCCAGATCGA 1.1 0.0011 P8 GC+1d culture TTTTGGATCT 1.1 0.0011 P8 GC+SHH+1d culture GGCAGCCCCC (2) 38.6 0.0386 P8 GC+SHH+1d culture AAGGAAGAGA (2) 11.7 0.0117 P8 GC+SHH+1d culture TCCAGATCGA 1.2 0.0012 P8 GC+SHH+1d culture TTTTGGATCT 1.2 0.0012 3T3 fibroblasts GGCAGCCCCC (2) 105.1 0.1051 3T3 fibroblasts AAGGAAGAGA (2) 28 0.028 3T3 fibroblasts TCCAGATCGA 3.5 0.0035 E15 cortex GGCAGCCCCC (2) 54.4 0.0544 E15 cortex AAGGAAGAGA (2) 14.8 0.0148 E15 cortex TCCAGATCGA 4.9 0.0049 P1 cortex GGCAGCCCCC (2) 18.2 0.0182 Hypothalamus AAGGAAGAGA (2) 1.8 0.0018 Hypothalamus TTTTGGATCT 1.8 0.0018 E12.5 retina GGCAGCCCCC (2) 20.7 0.0207 E12.5 retina AAGGAAGAGA (2) 15 0.015 E12.5 retina TTTTGGATCT 1.9 0.0019 E14.5 retina AAGGAAGAGA (2) 10.9 0.0109 E14.5 retina GGCAGCCCCC (2) 7.3 0.0073 E14.5 retina TCCAGATCGA 1.8 0.0018 E16.5 retina GGCAGCCCCC (2) 9.1 0.0091 E16.5 retina AAGGAAGAGA (2) 7.2 0.0072 E16.5 retina TTTTGGATCT 1.8 0.0018 E18.5 retina GGCAGCCCCC (2) 27.3 0.0273 E18.5 retina TCCAGATCGA 1.8 0.0018 P0.5 retina GGCAGCCCCC (2) 21.6 0.0216 P0.5 retina AAGGAAGAGA (2) 5.9 0.0059 P2.5 retina GGCAGCCCCC (2) 26.4 0.0264 P2.5 retina AAGGAAGAGA (2) 7 0.007 P4.5 retina GGCAGCCCCC (2) 15.9 0.0159 P4.5 retina AAGGAAGAGA (2) 7.9 0.0079 P6.5 retina GGCAGCCCCC (2) 16.7 0.0167 P6.5 retina AAGGAAGAGA (2) 1.7 0.0017 P10.5 crx- retina GGCAGCCCCC (2) 24.2 0.0242 P10.5 crx- retina AAGGAAGAGA (2) 3.7 0.0037 P10.5 crx+ retina GGCAGCCCCC (2) 15.4 0.0154 Adult retinal GGCAGCCCCC (2) 7.4 0.0074 Adult retinal AAGGAAGAGA (2) 3.7 0.0037 ONL GGCAGCCCCC (2) 9.6 0.0096