Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.268304	Trpc4ap	transient receptor potential cation channel, subfamily C, member 4 associated protein	2	2 90.0 cM	56407
Human Homolog	TRPC4AP[transient receptor potential cation channel, subfamily C, member 4 associated protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 31 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGTGCCTGT 14.7 0.0147 Cb medulloblastoma GAGTGCCTGT 9.2 0.0092 Cb medulloblastoma GCGGCAGCGC (2) 6.9 0.0069 P8 GC+1d culture GAGTGCCTGT 36.5 0.0365 P8 GC+1d culture GAGTGGCCTG 1.1 0.0011 P8 GC+1d culture GCGGCAGCGC (2) 1.1 0.0011 P8 GC+SHH+1d culture GAGTGCCTGT 42.2 0.0422 P8 GC+SHH+1d culture GAGTGGCCTG 1.2 0.0012 P8 GC+SHH+1d culture GCGGCAGCGC (2) 1.2 0.0012 3T3 fibroblasts GAGTGCCTGT 17.5 0.0175 3T3 fibroblasts GAGTGGCCTG 3.5 0.0035 E15 cortex GAGTGCCTGT 4.9 0.0049 P1 cortex GCGGCAGCGC (2) 9.1 0.0091 P1 cortex GAGTGCCTGT 4.5 0.0045 Hypothalamus GCGGCAGCGC (2) 18.1 0.0181 Hypothalamus GAGTGCCTGT 3.6 0.0036 E12.5 retina GAGTGCCTGT 5.6 0.0056 E14.5 retina GAGTGCCTGT 5.5 0.0055 E16.5 retina GAGTGCCTGT 9.1 0.0091 E18.5 retina GAGTGCCTGT 7.3 0.0073 P0.5 retina GAGTGCCTGT 13.7 0.0137 P2.5 retina GAGTGCCTGT 8.8 0.0088 P4.5 retina GAGTGCCTGT 15.9 0.0159 P4.5 retina GAGTGGCCTG 2 0.002 P6.5 retina GAGTGCCTGT 18.3 0.0183 P10.5 crx- retina GAGTGCCTGT 3.7 0.0037 P10.5 crx- retina GCGGCAGCGC (2) 1.9 0.0019 P10.5 crx+ retina GAGTGCCTGT 11.5 0.0115 P10.5 crx+ retina GCGGCAGCGC (2) 1.9 0.0019 Adult retinal GAGTGCCTGT 7.4 0.0074 ONL GAGTGCCTGT 1.9 0.0019