Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.26908	AI314760	expressed sequence AI314760	18		106885
Mm.26908	Csnk1a1	casein kinase 1, alpha 1	18	18 D3	93687
Gene Ontology	ATP binding | cellular_component unknown | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | transferase activity | Wnt receptor signaling pathway
Human Homolog	CSNK1A1[casein kinase 1, alpha 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 104 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TATGTGTGTT (2) 14.7 0.0147 P8 Cb GC CCGTTCTTCT (4) 4.9 0.0049 P8 Cb GC ATTTATCACA (2) 3.3 0.0033 P8 Cb GC CTTGTCAGTT (2) 3.3 0.0033 P8 Cb GC GTGTCCGGTT (2) 3.3 0.0033 P8 Cb GC GGAGAGACAA (2) 1.6 0.0016 Cb medulloblastoma TATGTGTGTT (2) 9.2 0.0092 Cb medulloblastoma CCGTTCTTCT (4) 4.6 0.0046 Cb medulloblastoma TGGTTGTGAA (2) 4.6 0.0046 Cb medulloblastoma ATTTATCACA (2) 2.3 0.0023 Cb medulloblastoma GAATCTTTAG (3) 2.3 0.0023 Cb medulloblastoma GAGTTAATTA (2) 2.3 0.0023 Cb medulloblastoma GTGTCCGGTT (2) 2.3 0.0023 P8 GC+1d culture TATGTGTGTT (2) 8 0.008 P8 GC+1d culture CTTGTCAGTT (2) 6.8 0.0068 P8 GC+1d culture CCGTTCTTCT (4) 4.6 0.0046 P8 GC+1d culture GAGTTAATTA (2) 2.3 0.0023 P8 GC+1d culture GTGGCTCATT (2) 2.3 0.0023 P8 GC+1d culture GTGTCCGGTT (2) 2.3 0.0023 P8 GC+1d culture TGGTTGTGAA (2) 2.3 0.0023 P8 GC+1d culture GGAGAGACAA (2) 1.1 0.0011 P8 GC+1d culture TCAAGATAAA (2) 1.1 0.0011 P8 GC+1d culture TTTGGTAAGA (2) 1.1 0.0011 P8 GC+SHH+1d culture TATGTGTGTT (2) 11.7 0.0117 P8 GC+SHH+1d culture GAGTTAATTA (2) 8.2 0.0082 P8 GC+SHH+1d culture CCGTTCTTCT (4) 4.7 0.0047 P8 GC+SHH+1d culture GTGTCCGGTT (2) 4.7 0.0047 P8 GC+SHH+1d culture CTTGTCAGTT (2) 3.5 0.0035 P8 GC+SHH+1d culture ATTTATCACA (2) 1.2 0.0012 P8 GC+SHH+1d culture GGAGAGACAA (2) 1.2 0.0012 P8 GC+SHH+1d culture TGGTTGTGAA (2) 1.2 0.0012 3T3 fibroblasts TATGTGTGTT (2) 10.5 0.0105 3T3 fibroblasts CTTGTCAGTT (2) 7 0.007 3T3 fibroblasts ATTTATCACA (2) 3.5 0.0035 3T3 fibroblasts GGAGAGACAA (2) 3.5 0.0035 E15 cortex CTTGTCAGTT (2) 9.9 0.0099 E15 cortex TATGTGTGTT (2) 4.9 0.0049 P1 cortex CCGTTCTTCT (4) 4.5 0.0045 P1 cortex CTTGTCAGTT (2) 4.5 0.0045 P1 cortex GAATCTTTAG (3) 4.5 0.0045 P1 cortex GGAGAGACAA (2) 4.5 0.0045 P1 cortex GTGGCTCATT (2) 4.5 0.0045 Hypothalamus ATTTATCACA (2) 5.4 0.0054 Hypothalamus TATGTGTGTT (2) 5.4 0.0054 Hypothalamus CTTGTCAGTT (2) 3.6 0.0036 Hypothalamus GAGTTAATTA (2) 1.8 0.0018 Hypothalamus TTTGGTAAGA (2) 1.8 0.0018 E12.5 retina TATGTGTGTT (2) 7.5 0.0075 E12.5 retina CCGTTCTTCT (4) 5.6 0.0056 E12.5 retina ATTTATCACA (2) 3.8 0.0038 E12.5 retina GTGTCCGGTT (2) 3.8 0.0038 E12.5 retina CTTGTCAGTT (2) 1.9 0.0019 E12.5 retina GTGGCTCATT (2) 1.9 0.0019 E14.5 retina CTTGTCAGTT (2) 5.5 0.0055 E14.5 retina TATGTGTGTT (2) 5.5 0.0055 E14.5 retina TCAAGATAAA (2) 1.8 0.0018 E14.5 retina TTTGGTAAGA (2) 1.8 0.0018 E16.5 retina TATGTGTGTT (2) 10.9 0.0109 E16.5 retina ATTTATCACA (2) 7.2 0.0072 E16.5 retina CCGTTCTTCT (4) 1.8 0.0018 E18.5 retina TATGTGTGTT (2) 12.7 0.0127 E18.5 retina CTTGTCAGTT (2) 3.6 0.0036 E18.5 retina CCGTTCTTCT (4) 1.8 0.0018 E18.5 retina GTGTCCGGTT (2) 1.8 0.0018 P0.5 retina TATGTGTGTT (2) 13.7 0.0137 P0.5 retina CTTGTCAGTT (2) 3.9 0.0039 P0.5 retina ATTTATCACA (2) 2 0.002 P2.5 retina TATGTGTGTT (2) 8.8 0.0088 P2.5 retina GAATCTTTAG (3) 1.8 0.0018 P2.5 retina GTGTCCGGTT (2) 1.8 0.0018 P2.5 retina TTTGGTAAGA (2) 1.8 0.0018 P4.5 retina CTTGTCAGTT (2) 4 0.004 P4.5 retina ATTTATCACA (2) 2 0.002 P4.5 retina CCGTTCTTCT (4) 2 0.002 P4.5 retina GTGTCCGGTT (2) 2 0.002 P4.5 retina TATGTGTGTT (2) 2 0.002 P6.5 retina TATGTGTGTT (2) 6.7 0.0067 P6.5 retina CCGTTCTTCT (4) 5 0.005 P6.5 retina ATTTATCACA (2) 1.7 0.0017 P6.5 retina TCAAGATAAA (2) 1.7 0.0017 P6.5 retina TGGTTGTGAA (2) 1.7 0.0017 P6.5 retina TTTGGTAAGA (2) 1.7 0.0017 P10.5 crx- retina TATGTGTGTT (2) 20.4 0.0204 P10.5 crx- retina CTTGTCAGTT (2) 3.7 0.0037 P10.5 crx- retina TCAAGATAAA (2) 3.7 0.0037 P10.5 crx- retina CCGTTCTTCT (4) 1.9 0.0019 P10.5 crx- retina GAATCTTTAG (3) 1.9 0.0019 P10.5 crx- retina GTGTCCGGTT (2) 1.9 0.0019 P10.5 crx+ retina CTTGTCAGTT (2) 7.7 0.0077 P10.5 crx+ retina GTGTCCGGTT (2) 7.7 0.0077 P10.5 crx+ retina CCGTTCTTCT (4) 3.8 0.0038 P10.5 crx+ retina GAGTTAATTA (2) 1.9 0.0019 P10.5 crx+ retina TATGTGTGTT (2) 1.9 0.0019 P10.5 crx+ retina TGGTTGTGAA (2) 1.9 0.0019 Adult retinal ATTTATCACA (2) 5.6 0.0056 Adult retinal CCGTTCTTCT (4) 5.6 0.0056 Adult retinal GTGTCCGGTT (2) 3.7 0.0037 Adult retinal TATGTGTGTT (2) 3.7 0.0037 ONL TATGTGTGTT (2) 7.7 0.0077 ONL CCGTTCTTCT (4) 3.8 0.0038 ONL GTGGCTCATT (2) 3.8 0.0038 ONL ATTTATCACA (2) 1.9 0.0019 ONL CTTGTCAGTT (2) 1.9 0.0019 ONL GTGTCCGGTT (2) 1.9 0.0019