Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.272870
H2afy2
H2A histone family, member Y2
15
67552
Mm.272870
H2afy3
H2A histone family, member Y3
10
404634
Gene Ontology
chromosome
|
DNA binding
|
nucleosome
|
nucleus
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 39 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGTTTTTCTT
(
3
)
4.9
0.0049
Cb medulloblastoma
AATCAGAGGA
(
2
)
2.3
0.0023
P8 GC+1d culture
TGTTTTTCTT
(
3
)
8
0.008
P8 GC+1d culture
CCCCGTCACC
(
3
)
3.4
0.0034
P8 GC+1d culture
GGAGCGGAGG
(
3
)
1.1
0.0011
P8 GC+1d culture
TTTGTTTGTC
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
TGTTTTTCTT
(
3
)
11.7
0.0117
P8 GC+SHH+1d culture
ACTTTAAACT
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
CCCCGTCACC
(
3
)
1.2
0.0012
E15 cortex
TGTTTTTCTT
(
3
)
4.9
0.0049
P1 cortex
TGTTTTTCTT
(
3
)
4.5
0.0045
E12.5 retina
CCCCGTCACC
(
3
)
1.9
0.0019
E12.5 retina
GGAGCGGAGG
(
3
)
1.9
0.0019
E12.5 retina
TTTGTTTGTC
(
3
)
1.9
0.0019
E14.5 retina
TGTTTTTCTT
(
3
)
3.6
0.0036
E14.5 retina
CCCCGTCACC
(
3
)
1.8
0.0018
E16.5 retina
AATCAGAGGA
(
2
)
5.4
0.0054
E16.5 retina
TGTTTTTCTT
(
3
)
1.8
0.0018
E18.5 retina
TGTTTTTCTT
(
3
)
5.5
0.0055
E18.5 retina
AATCAGAGGA
(
2
)
1.8
0.0018
E18.5 retina
GGAGCGGAGG
(
3
)
1.8
0.0018
E18.5 retina
TTTGTTTGTC
(
3
)
1.8
0.0018
P0.5 retina
TGTTTTTCTT
(
3
)
7.9
0.0079
P2.5 retina
AATCAGAGGA
(
2
)
3.5
0.0035
P2.5 retina
ACTTTAAACT
(
3
)
1.8
0.0018
P2.5 retina
CCCCGTCACC
(
3
)
1.8
0.0018
P4.5 retina
AATCAGAGGA
(
2
)
2
0.002
P4.5 retina
ACTTTAAACT
(
3
)
2
0.002
P6.5 retina
TGTTTTTCTT
(
3
)
1.7
0.0017
P10.5 crx- retina
AATCAGAGGA
(
2
)
1.9
0.0019
P10.5 crx- retina
AGATTGTCCA
(
2
)
1.9
0.0019
P10.5 crx- retina
GGAGCGGAGG
(
3
)
1.9
0.0019
P10.5 crx- retina
TTTGTTTGTC
(
3
)
1.9
0.0019
P10.5 crx+ retina
AGATTGTCCA
(
2
)
3.8
0.0038
Adult retinal
AATCAGAGGA
(
2
)
1.9
0.0019
Adult retinal
ACTTTAAACT
(
3
)
1.9
0.0019
Adult retinal
AGATTGTCCA
(
2
)
1.9
0.0019
Adult retinal
TTTGTTTGTC
(
3
)
1.9
0.0019
ONL
TGTTTTTCTT
(
3
)
1.9
0.0019
