Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.272972	Apg16l	APG16 autophagy 16-like (S. cerevisiae)	1		77040
Gene Ontology	autophagic vacuole | autophagic vacuole formation | protein binding
Human Homolog	APG16L[APG16 autophagy 16-like (S. cerevisiae)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 40 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGTGCTGGAG 9.8 0.0098 P8 Cb GC GACCGCAGGG (2) 1.6 0.0016 P8 Cb GC TGGAAGCTGA (3) 1.6 0.0016 Cb medulloblastoma AGTGCTGGAG 4.6 0.0046 Cb medulloblastoma GACCGCAGGG (2) 2.3 0.0023 P8 GC+1d culture GACCGCAGGG (2) 2.3 0.0023 P8 GC+1d culture TGGAAGCTGA (3) 2.3 0.0023 P8 GC+1d culture GTCTGAGCGC 1.1 0.0011 P8 GC+SHH+1d culture GCGGCCTCGT 1.2 0.0012 P8 GC+SHH+1d culture TGGAAGCTGA (3) 1.2 0.0012 3T3 fibroblasts GCGGCCTCGT 3.5 0.0035 3T3 fibroblasts TGGAAGCTGA (3) 3.5 0.0035 E15 cortex TGGAAGCTGA (3) 4.9 0.0049 P1 cortex AGTGCTGGAG 4.5 0.0045 Hypothalamus TTGTCCCTGC 5.4 0.0054 Hypothalamus AGTGCTGGAG 3.6 0.0036 Hypothalamus GTCTGAGCGC 3.6 0.0036 E12.5 retina AGTGCTGGAG 1.9 0.0019 E12.5 retina GACCGCAGGG (2) 1.9 0.0019 E12.5 retina TTGTCCCTGC 1.9 0.0019 E14.5 retina AGTGCTGGAG 3.6 0.0036 E14.5 retina TGGAAGCTGA (3) 3.6 0.0036 E16.5 retina AGTGCTGGAG 3.6 0.0036 E16.5 retina TGGAAGCTGA (3) 3.6 0.0036 E18.5 retina GACCGCAGGG (2) 1.8 0.0018 P0.5 retina AGTGCTGGAG 3.9 0.0039 P0.5 retina TGGAAGCTGA (3) 3.9 0.0039 P2.5 retina GACCGCAGGG (2) 1.8 0.0018 P4.5 retina AGTGCTGGAG 2 0.002 P6.5 retina AGTGCTGGAG 3.3 0.0033 P10.5 crx- retina TGGAAGCTGA (3) 7.4 0.0074 P10.5 crx- retina AGTGCTGGAG 5.6 0.0056 P10.5 crx+ retina AGTGCTGGAG 5.8 0.0058 P10.5 crx+ retina TTGTCCCTGC 3.8 0.0038 P10.5 crx+ retina GCGGCCTCGT 1.9 0.0019 P10.5 crx+ retina GTCTGAGCGC 1.9 0.0019 Adult retinal AGTGCTGGAG 1.9 0.0019 Adult retinal GACCGCAGGG (2) 1.9 0.0019 ONL AGTGCTGGAG 1.9 0.0019 ONL GACCGCAGGG (2) 1.9 0.0019