Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.273098	Agrn	agrin	4	4 E2 (4 80.0 cM)	11603
Gene Ontology	acetylcholine receptor regulator activity | extracellular space | neurotransmitter receptor metabolism | plasma membrane organization and biogenesis | synaptic transmission
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 15 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 45 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAATAAAGTC 8.2 0.0082 Cb medulloblastoma AAATAAAGTC 4.6 0.0046 P8 GC+1d culture AAATAAAGTC 8 0.008 P8 GC+1d culture GGGAGTGCAT (2) 6.8 0.0068 P8 GC+1d culture CAGCTCCCTC (2) 2.3 0.0023 P8 GC+1d culture GCTTGTGACT 1.1 0.0011 P8 GC+SHH+1d culture AAATAAAGTC 8.2 0.0082 P8 GC+SHH+1d culture GGGAGTGCAT (2) 7 0.007 P1 cortex AAATAAAGTC 9.1 0.0091 Hypothalamus AAATAAAGTC 12.7 0.0127 Hypothalamus GGGAGTGCAT (2) 1.8 0.0018 E12.5 retina AAATAAAGTC 24.4 0.0244 E14.5 retina AAATAAAGTC 36.4 0.0364 E14.5 retina CAGCTCCCTC (2) 7.3 0.0073 E16.5 retina AAATAAAGTC 39.8 0.0398 E16.5 retina CAGCTCCCTC (2) 7.2 0.0072 E16.5 retina GGGGCTCAAA 3.6 0.0036 E18.5 retina AAATAAAGTC 40 0.04 E18.5 retina GGGGCTCAAA 1.8 0.0018 P0.5 retina AAATAAAGTC 19.6 0.0196 P0.5 retina GGGGCTCAAA 3.9 0.0039 P2.5 retina AAATAAAGTC 28.2 0.0282 P2.5 retina CAGCTCCCTC (2) 1.8 0.0018 P2.5 retina GCTTGTGACT 1.8 0.0018 P2.5 retina GGGAGTGCAT (2) 1.8 0.0018 P4.5 retina AAATAAAGTC 35.7 0.0357 P4.5 retina CAGCTCCCTC (2) 2 0.002 P4.5 retina GGGAGTGCAT (2) 2 0.002 P6.5 retina AAATAAAGTC 43.4 0.0434 P6.5 retina GGGAGTGCAT (2) 3.3 0.0033 P6.5 retina GGGGCTCAAA 3.3 0.0033 P6.5 retina CAGCTCCCTC (2) 1.7 0.0017 P6.5 retina GCTTGTGACT 1.7 0.0017 P10.5 crx- retina AAATAAAGTC 14.9 0.0149 P10.5 crx- retina CAGCTCCCTC (2) 3.7 0.0037 P10.5 crx- retina GGGAGTGCAT (2) 1.9 0.0019 P10.5 crx+ retina AAATAAAGTC 15.4 0.0154 P10.5 crx+ retina CAGCTCCCTC (2) 1.9 0.0019 P10.5 crx+ retina GGGAGTGCAT (2) 1.9 0.0019 P10.5 crx+ retina GGGGCTCAAA 1.9 0.0019 Adult retinal GGGAGTGCAT (2) 7.4 0.0074 Adult retinal AAATAAAGTC 3.7 0.0037 Adult retinal GGGGCTCAAA 1.9 0.0019 ONL GGGAGTGCAT (2) 1.9 0.0019 ONL GGGGCTCAAA 1.9 0.0019