Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.27366
D7Bwg0611e
DNA segment, Chr 7, Brigham & Women's Genetics 0611 expressed
7
7 13.0 cM
52857
Human Homolog
KIAA1533[KIAA1533]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 42 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CACACCTCAG
(
3
)
3.3
0.0033
P8 Cb GC
GAACCCTGGC
(
2
)
1.6
0.0016
P8 Cb GC
GCTGACCTTC
1.6
0.0016
Cb medulloblastoma
CACACCTCAG
(
3
)
2.3
0.0023
P8 GC+1d culture
GAACCCTGGC
(
2
)
9.1
0.0091
P8 GC+1d culture
GCTGACCTTC
2.3
0.0023
P8 GC+1d culture
CACACCTCAG
(
3
)
1.1
0.0011
P8 GC+1d culture
TGTCCTTCTG
1.1
0.0011
P8 GC+SHH+1d culture
GAACCCTGGC
(
2
)
5.9
0.0059
P8 GC+SHH+1d culture
CACACCTCAG
(
3
)
4.7
0.0047
P8 GC+SHH+1d culture
GCTGACCTTC
2.3
0.0023
3T3 fibroblasts
GAACCCTGGC
(
2
)
3.5
0.0035
E15 cortex
GAACCCTGGC
(
2
)
14.8
0.0148
P1 cortex
CACACCTCAG
(
3
)
4.5
0.0045
P1 cortex
GAACCCTGGC
(
2
)
4.5
0.0045
Hypothalamus
CACACCTCAG
(
3
)
3.6
0.0036
E12.5 retina
CACACCTCAG
(
3
)
7.5
0.0075
E12.5 retina
GCTGACCTTC
5.6
0.0056
E12.5 retina
GAACCCTGGC
(
2
)
1.9
0.0019
E14.5 retina
CACACCTCAG
(
3
)
3.6
0.0036
E14.5 retina
GAACCCTGGC
(
2
)
3.6
0.0036
E14.5 retina
TGTCCTTCTG
1.8
0.0018
E16.5 retina
CACACCTCAG
(
3
)
12.7
0.0127
E16.5 retina
GAACCCTGGC
(
2
)
5.4
0.0054
E16.5 retina
TGTCCTTCTG
1.8
0.0018
E18.5 retina
CACACCTCAG
(
3
)
9.1
0.0091
E18.5 retina
GAACCCTGGC
(
2
)
5.5
0.0055
P0.5 retina
GAACCCTGGC
(
2
)
11.8
0.0118
P2.5 retina
CACACCTCAG
(
3
)
15.8
0.0158
P4.5 retina
GAACCCTGGC
(
2
)
7.9
0.0079
P4.5 retina
CACACCTCAG
(
3
)
2
0.002
P6.5 retina
CACACCTCAG
(
3
)
5
0.005
P6.5 retina
GAACCCTGGC
(
2
)
5
0.005
P6.5 retina
GCTGACCTTC
1.7
0.0017
P10.5 crx- retina
CACACCTCAG
(
3
)
9.3
0.0093
P10.5 crx- retina
GAACCCTGGC
(
2
)
7.4
0.0074
P10.5 crx+ retina
CACACCTCAG
(
3
)
9.6
0.0096
P10.5 crx+ retina
GAACCCTGGC
(
2
)
3.8
0.0038
Adult retinal
GAACCCTGGC
(
2
)
5.6
0.0056
Adult retinal
CACACCTCAG
(
3
)
3.7
0.0037
ONL
GAACCCTGGC
(
2
)
9.6
0.0096
ONL
GCTGACCTTC
1.9
0.0019
