Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.274995	Snurf	SNRPN upstream reading frame	7		84704
Mm.274995	Snrpn	small nuclear ribonucleoprotein N	7	7 29.0 cM	20646
Gene Ontology	nucleus | ribonucleoprotein complex | spliceosome complex | viral nucleocapsid
Human Homolog	SNURF[SNRPN upstream reading frame]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 46 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTCCTCCAG (2) 8.2 0.0082 P8 Cb GC ACTGTGGGTA (2) 1.6 0.0016 Cb medulloblastoma CCTCCTCCAG (2) 11.6 0.0116 Cb medulloblastoma ACTGTGGGTA (2) 2.3 0.0023 P8 GC+1d culture CCTCCTCCAG (2) 13.7 0.0137 P8 GC+1d culture CTTTTTGTGA (2) 1.1 0.0011 P8 GC+SHH+1d culture CCTCCTCCAG (2) 12.9 0.0129 P8 GC+SHH+1d culture CTTTTTGTGA (2) 3.5 0.0035 3T3 fibroblasts CCTCCTCCAG (2) 7 0.007 E15 cortex CCTCCTCCAG (2) 29.7 0.0297 P1 cortex CCTCCTCCAG (2) 27.3 0.0273 Hypothalamus CCTCCTCCAG (2) 29 0.029 Hypothalamus ACCCCACAGG (2) 3.6 0.0036 Hypothalamus GGTGGTCTCA (2) 3.6 0.0036 Hypothalamus TACTGGGTCT (2) 1.8 0.0018 E12.5 retina CCTCCTCCAG (2) 1.9 0.0019 E14.5 retina CCTCCTCCAG (2) 3.6 0.0036 E14.5 retina CCTCCTCCGG (3) 1.8 0.0018 E14.5 retina TACTGGGTCT (2) 1.8 0.0018 E16.5 retina CCTCCTCCAG (2) 12.7 0.0127 E16.5 retina GGTGGTCTCA (2) 1.8 0.0018 E18.5 retina CCTCCTCCAG (2) 1.8 0.0018 P0.5 retina ACCCCACAGG (2) 3.9 0.0039 P0.5 retina CCTCCTCCAG (2) 3.9 0.0039 P0.5 retina ACTGTGGGTA (2) 2 0.002 P0.5 retina CTTTTTGTGA (2) 2 0.002 P2.5 retina CCTCCTCCAG (2) 8.8 0.0088 P2.5 retina CTTTTTGTGA (2) 1.8 0.0018 P2.5 retina TACTGGGTCT (2) 1.8 0.0018 P4.5 retina CCTCCTCCAG (2) 4 0.004 P4.5 retina TACTGGGTCT (2) 2 0.002 P6.5 retina CCTCCTCCAG (2) 16.7 0.0167 P6.5 retina CCTCCTCCGG (3) 3.3 0.0033 P6.5 retina ACTGTGGGTA (2) 1.7 0.0017 P10.5 crx- retina CCTCCTCCAG (2) 39 0.039 P10.5 crx- retina GGTGGTCTCA (2) 3.7 0.0037 P10.5 crx- retina ACCCCACAGG (2) 1.9 0.0019 P10.5 crx- retina ACTGTGGGTA (2) 1.9 0.0019 P10.5 crx- retina CTTTTTGTGA (2) 1.9 0.0019 P10.5 crx+ retina CCTCCTCCAG (2) 9.6 0.0096 P10.5 crx+ retina TACTGGGTCT (2) 3.8 0.0038 Adult retinal CCTCCTCCAG (2) 25.9 0.0259 Adult retinal ACCCCACAGG (2) 1.9 0.0019 Adult retinal CCTCCTCCGG (3) 1.9 0.0019 Adult retinal TACTGGGTCT (2) 1.9 0.0019 ONL CCTCCTCCGG (3) 1.9 0.0019