Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.276133
AA522013
EST AA522013
6
57884
Mm.276133
E130108L08Rik
RIKEN cDNA E130108L08 gene
6
78000
Mm.276133
Luc7l2
LUC7-like 2 (S. cerevisiae)
6
192196
Human Homolog
LUC7L2[LUC7-like 2 (S. cerevisiae)]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 54 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTCAAAAGAG
(
4
)
4.9
0.0049
P8 Cb GC
CTACTAACCC
(
5
)
1.6
0.0016
P8 Cb GC
TGAATAACAA
(
3
)
1.6
0.0016
P8 Cb GC
TGAATGAGAA
(
3
)
1.6
0.0016
Cb medulloblastoma
TTCAAAAGAG
(
4
)
2.3
0.0023
P8 GC+1d culture
TTCAAAAGAG
(
4
)
5.7
0.0057
P8 GC+1d culture
CAAACATAGC
(
3
)
4.6
0.0046
P8 GC+1d culture
AGCCGGAGTA
(
3
)
3.4
0.0034
P8 GC+1d culture
TGAATGAGAA
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
CAAACATAGC
(
3
)
4.7
0.0047
P8 GC+SHH+1d culture
AGCCGGAGTA
(
3
)
2.3
0.0023
P8 GC+SHH+1d culture
TTCAAAAGAG
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
CTACTAACCC
(
5
)
1.2
0.0012
3T3 fibroblasts
AGCCGGAGTA
(
3
)
3.5
0.0035
3T3 fibroblasts
CTACTAACCC
(
5
)
3.5
0.0035
P1 cortex
TGAAAATGTA
(
3
)
22.7
0.0227
P1 cortex
TTCACCTTTA
(
3
)
4.5
0.0045
Hypothalamus
AGCCGGAGTA
(
3
)
1.8
0.0018
Hypothalamus
CAAACATAGC
(
3
)
1.8
0.0018
Hypothalamus
TTCAAAAGAG
(
4
)
1.8
0.0018
E12.5 retina
AGCCGGAGTA
(
3
)
3.8
0.0038
E14.5 retina
AGCCGGAGTA
(
3
)
1.8
0.0018
E14.5 retina
CAAACATAGC
(
3
)
1.8
0.0018
E14.5 retina
TTCAAAAGAG
(
4
)
1.8
0.0018
E16.5 retina
TTCAAAAGAG
(
4
)
5.4
0.0054
E16.5 retina
CAAACATAGC
(
3
)
3.6
0.0036
E18.5 retina
CAAACATAGC
(
3
)
3.6
0.0036
E18.5 retina
AGCCGGAGTA
(
3
)
1.8
0.0018
E18.5 retina
TGAATAACAA
(
3
)
1.8
0.0018
E18.5 retina
TTCAAAAGAG
(
4
)
1.8
0.0018
E18.5 retina
TTCACCTTTA
(
3
)
1.8
0.0018
P0.5 retina
TTCAAAAGAG
(
4
)
7.9
0.0079
P0.5 retina
CAAACATAGC
(
3
)
3.9
0.0039
P2.5 retina
CAAACATAGC
(
3
)
3.5
0.0035
P2.5 retina
TGAATAACAA
(
3
)
1.8
0.0018
P2.5 retina
TTCAAAAGAG
(
4
)
1.8
0.0018
P4.5 retina
CAAACATAGC
(
3
)
2
0.002
P4.5 retina
TTCAAAAGAG
(
4
)
2
0.002
P6.5 retina
CAAACATAGC
(
3
)
8.3
0.0083
P6.5 retina
TTCAAAAGAG
(
4
)
3.3
0.0033
P6.5 retina
AGCCGGAGTA
(
3
)
1.7
0.0017
P6.5 retina
CTACTAACCC
(
5
)
1.7
0.0017
P6.5 retina
TTCACCTTTA
(
3
)
1.7
0.0017
P10.5 crx- retina
AGCCGGAGTA
(
3
)
5.6
0.0056
P10.5 crx- retina
CAAACATAGC
(
3
)
5.6
0.0056
P10.5 crx- retina
TTCAAAAGAG
(
4
)
3.7
0.0037
P10.5 crx+ retina
TTCAAAAGAG
(
4
)
3.8
0.0038
P10.5 crx+ retina
CAAACATAGC
(
3
)
1.9
0.0019
Adult retinal
CAAACATAGC
(
3
)
5.6
0.0056
Adult retinal
TTCAAAAGAG
(
4
)
5.6
0.0056
Adult retinal
AGCCGGAGTA
(
3
)
1.9
0.0019
ONL
CAAACATAGC
(
3
)
1.9
0.0019
ONL
TGAATGAGAA
(
3
)
1.9
0.0019
ONL
TTCAAAAGAG
(
4
)
1.9
0.0019
