Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.277449
3010024O21Rik
RIKEN cDNA 3010024O21 gene
11
76840
Mm.277449
6720485C15Rik
RIKEN cDNA 6720485C15 gene
11
68087
Gene Ontology
kinase activity
Human Homolog
FLJ22955[hypothetical protein FLJ22955]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 36 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCCACAAGCT
(
4
)
3.3
0.0033
P8 Cb GC
CCAGGCAAGT
(
3
)
1.6
0.0016
P8 Cb GC
CTCCCTGCCC
(
3
)
1.6
0.0016
Cb medulloblastoma
CTCCCTGCCC
(
3
)
2.3
0.0023
P8 GC+1d culture
CTCCCTGCCC
(
3
)
8
0.008
P8 GC+1d culture
GTGGCAGGAA
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
CTCCCTGCCC
(
3
)
9.4
0.0094
P8 GC+SHH+1d culture
TCCACAACAC
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
CCAGGCAAGT
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
GTGGCAGGAA
(
2
)
1.2
0.0012
3T3 fibroblasts
CTCCCTGCCC
(
3
)
7
0.007
3T3 fibroblasts
TCCACAACAC
(
2
)
3.5
0.0035
E15 cortex
CTCCCTGCCC
(
3
)
19.8
0.0198
E15 cortex
CCAGGCAAGT
(
3
)
4.9
0.0049
P1 cortex
CTCCCTGCCC
(
3
)
9.1
0.0091
Hypothalamus
TGGGGCAGGC
(
2
)
3.6
0.0036
Hypothalamus
GTGGCAGGAA
(
2
)
1.8
0.0018
E12.5 retina
CTCCCTGCCC
(
3
)
9.4
0.0094
E14.5 retina
TGGGGCAGGC
(
2
)
41.9
0.0419
E16.5 retina
CTCCCTGCCC
(
3
)
3.6
0.0036
E18.5 retina
TGGGGCAGGC
(
2
)
29.1
0.0291
E18.5 retina
CTCCCTGCCC
(
3
)
5.5
0.0055
E18.5 retina
CCAGGCAAGT
(
3
)
1.8
0.0018
P0.5 retina
CTCCCTGCCC
(
3
)
7.9
0.0079
P0.5 retina
GCCACAAGCT
(
4
)
2
0.002
P2.5 retina
CTCCCTGCCC
(
3
)
7
0.007
P2.5 retina
GCCACAAGCT
(
4
)
1.8
0.0018
P2.5 retina
GTGGCAGGAA
(
2
)
1.8
0.0018
P4.5 retina
CTCCCTGCCC
(
3
)
5.9
0.0059
P6.5 retina
CTCCCTGCCC
(
3
)
8.3
0.0083
P10.5 crx- retina
CTCCCTGCCC
(
3
)
3.7
0.0037
P10.5 crx+ retina
CTCCCTGCCC
(
3
)
1.9
0.0019
Adult retinal
CTCCCTGCCC
(
3
)
3.7
0.0037
Adult retinal
CCAGGCAAGT
(
3
)
1.9
0.0019
ONL
TGGGGCAGGC
(
2
)
53.6
0.0536
ONL
CTCCCTGCCC
(
3
)
1.9
0.0019
