Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.284853	Gnat1	guanine nucleotide binding protein, alpha transducing 1	9	9 F2 (9 59.0 cM)	14685
Gene Ontology	G-protein coupled receptor protein signaling pathway | G-protein signaling, coupled to cGMP nucleotide second messenger | GTP binding | GTPase activity | GTPase activity | heterotrimeric G-protein complex | heterotrimeric G-protein complex | membrane fraction | phototransduction | signal transducer activity | signal transduction | vision
Human Homolog	GNAT1[guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 14 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 45 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  Cb medulloblastoma GTGCTGGTGG (2) 2.3 0.0023 P8 GC+1d culture GTGGCTGGGT 2.3 0.0023 P8 GC+1d culture GTGCCTGGGG (2) 1.1 0.0011 P8 GC+1d culture GTGCTGGTGG (2) 1.1 0.0011 P8 GC+1d culture GTGTCTTTTC 1.1 0.0011 P8 GC+SHH+1d culture GTGCCTGGGG (2) 1.2 0.0012 P8 GC+SHH+1d culture GTGCTGGGTG (3) 1.2 0.0012 P8 GC+SHH+1d culture GTGCTGGTTG 1.2 0.0012 3T3 fibroblasts GTGCTGGGTG (3) 3.5 0.0035 E15 cortex GTGCCTGGGG (2) 14.8 0.0148 E15 cortex GTGGCTGGGT 4.9 0.0049 P1 cortex GTGCTGGTTG 4.5 0.0045 Hypothalamus GTGCTGGTGG (2) 1.8 0.0018 Hypothalamus TTGTCCCTCC 1.8 0.0018 E14.5 retina GTGCCTGGGG (2) 1.8 0.0018 E14.5 retina GTGTCTTTTC 1.8 0.0018 E16.5 retina GTGCCTGGGG (2) 1.8 0.0018 E18.5 retina GTGCCTGGGG (2) 3.6 0.0036 E18.5 retina GTGTCTTTTC 1.8 0.0018 P0.5 retina GTGGCTGGGT 2 0.002 P2.5 retina GTGGCTGGGT 1.8 0.0018 P4.5 retina GTGCCTGGGG (2) 2 0.002 P6.5 retina GTGCCTGGGG (2) 1.7 0.0017 P10.5 crx- retina GTGCTGGGTG (3) 3.7 0.0037 P10.5 crx- retina GTGCCTGGGG (2) 1.9 0.0019 P10.5 crx- retina GTGCTGGTGG (2) 1.9 0.0019 P10.5 crx- retina GTGGCTGGGT 1.9 0.0019 P10.5 crx+ retina TTGTCCCTCC 44.2 0.0442 P10.5 crx+ retina AGGCTTGCAG 3.8 0.0038 P10.5 crx+ retina GTGCTGGTGG (2) 3.8 0.0038 P10.5 crx+ retina GTGCTGGTTG 1.9 0.0019 P10.5 crx+ retina GTGGCTGGGT 1.9 0.0019 Adult retinal TTGTCCCTCC 370.3 0.3703 Adult retinal AGGCTTGCAG 50 0.05 Adult retinal ACGTGCGCTA 14.8 0.0148 Adult retinal GTGCTGGTGG (2) 13 0.013 Adult retinal GCAGATACTA 3.7 0.0037 Adult retinal GTGGCTGGGT 3.7 0.0037 ONL TTGTCCCTCC 327.5 0.3275 ONL ACGTGCGCTA 19.2 0.0192 ONL AGGCTTGCAG 17.2 0.0172 ONL GTGCTGGTGG (2) 5.7 0.0057 ONL GCAGATACTA 3.8 0.0038 ONL GTGGCTGGGT 1.9 0.0019 ONL GTGTCTTTTC 1.9 0.0019