Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.28721	Brd3	bromodomain containing 3	2		67382
Mm.28721	D2Bwg1423e	DNA segment, Chr 2, Brigham & Women's Genetics 1423 expressed	2	2 20.0 cM	329372
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 88 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AACCTTTCTC (2) 6.5 0.0065 P8 Cb GC GAGGCGCCTG (2) 3.3 0.0033 P8 Cb GC GGAACCAGCC (2) 3.3 0.0033 P8 Cb GC ACTTTTCTCT (2) 1.6 0.0016 P8 Cb GC ATTACCAGAG (2) 1.6 0.0016 Cb medulloblastoma GGAACCAGCC (2) 4.6 0.0046 Cb medulloblastoma ACAGCTGCAG (2) 2.3 0.0023 P8 GC+1d culture AACCTTTCTC (2) 13.7 0.0137 P8 GC+1d culture GGAACCAGCC (2) 3.4 0.0034 P8 GC+1d culture TGTAGAGTGA (2) 3.4 0.0034 P8 GC+1d culture TGACCTCTAG (3) 2.3 0.0023 P8 GC+1d culture CAAGTTTACC (2) 1.1 0.0011 P8 GC+1d culture GAGGCGCCTG (2) 1.1 0.0011 P8 GC+1d culture GCCACCACTT (3) 1.1 0.0011 P8 GC+SHH+1d culture GGAACCAGCC (2) 7 0.007 P8 GC+SHH+1d culture AACCTTTCTC (2) 3.5 0.0035 P8 GC+SHH+1d culture ACAGCTGCAG (2) 2.3 0.0023 P8 GC+SHH+1d culture CAAGTTTACC (2) 2.3 0.0023 P8 GC+SHH+1d culture TGACCTCTAG (3) 2.3 0.0023 P8 GC+SHH+1d culture GCCACCACTT (3) 1.2 0.0012 P8 GC+SHH+1d culture GCCAGGAAGC (3) 1.2 0.0012 P8 GC+SHH+1d culture GGCAGGCCCT (2) 1.2 0.0012 3T3 fibroblasts GGAACCAGCC (2) 14 0.014 E15 cortex GAGGCGCCTG (2) 29.7 0.0297 E15 cortex CAAGTTTACC (2) 19.8 0.0198 E15 cortex AACCTTTCTC (2) 14.8 0.0148 E15 cortex GCCAGGAAGC (3) 9.9 0.0099 E15 cortex GGAACCAGCC (2) 9.9 0.0099 E15 cortex ACTTTTCTCT (2) 4.9 0.0049 E15 cortex AGCTATGATG (2) 4.9 0.0049 E15 cortex GGCAGGCCCT (2) 4.9 0.0049 E15 cortex TGACCTCTAG (3) 4.9 0.0049 P1 cortex GGAACCAGCC (2) 18.2 0.0182 P1 cortex AACCTTTCTC (2) 9.1 0.0091 P1 cortex ACTTTTCTCT (2) 9.1 0.0091 P1 cortex CAAGTTTACC (2) 4.5 0.0045 P1 cortex GAGGCGCCTG (2) 4.5 0.0045 Hypothalamus GGAACCAGCC (2) 3.6 0.0036 Hypothalamus CAAGTTTACC (2) 1.8 0.0018 E12.5 retina AACCTTTCTC (2) 9.4 0.0094 E12.5 retina ACAGCTGCAG (2) 1.9 0.0019 E12.5 retina ACTTTTCTCT (2) 1.9 0.0019 E12.5 retina AGCTATGATG (2) 1.9 0.0019 E12.5 retina GGAACCAGCC (2) 1.9 0.0019 E12.5 retina TGTAGAGTGA (2) 1.9 0.0019 E14.5 retina AACCTTTCTC (2) 5.5 0.0055 E14.5 retina GGAACCAGCC (2) 5.5 0.0055 E14.5 retina GAGGCGCCTG (2) 1.8 0.0018 E14.5 retina GCCACCACTT (3) 1.8 0.0018 E14.5 retina GCCAGGAAGC (3) 1.8 0.0018 E16.5 retina GGAACCAGCC (2) 7.2 0.0072 E16.5 retina AACCTTTCTC (2) 1.8 0.0018 E16.5 retina GAGGCGCCTG (2) 1.8 0.0018 E18.5 retina AACCTTTCTC (2) 14.6 0.0146 E18.5 retina GGAACCAGCC (2) 1.8 0.0018 E18.5 retina GGCAGGCCCT (2) 1.8 0.0018 P0.5 retina GGAACCAGCC (2) 7.9 0.0079 P0.5 retina ACTTTTCTCT (2) 3.9 0.0039 P0.5 retina GAGGCGCCTG (2) 3.9 0.0039 P0.5 retina AACCTTTCTC (2) 2 0.002 P0.5 retina ACAGCTGCAG (2) 2 0.002 P0.5 retina TGACCTCTAG (3) 2 0.002 P2.5 retina AACCTTTCTC (2) 3.5 0.0035 P2.5 retina GAGGCGCCTG (2) 3.5 0.0035 P2.5 retina GGAACCAGCC (2) 1.8 0.0018 P2.5 retina GGCAGGCCCT (2) 1.8 0.0018 P2.5 retina TGACCTCTAG (3) 1.8 0.0018 P4.5 retina AACCTTTCTC (2) 5.9 0.0059 P4.5 retina ACAGCTGCAG (2) 2 0.002 P4.5 retina CAAGTTTACC (2) 2 0.002 P4.5 retina GGAACCAGCC (2) 2 0.002 P4.5 retina TGACCTCTAG (3) 2 0.002 P6.5 retina AACCTTTCTC (2) 10 0.01 P6.5 retina ACTTTTCTCT (2) 1.7 0.0017 P6.5 retina ATTACCAGAG (2) 1.7 0.0017 P6.5 retina GGAACCAGCC (2) 1.7 0.0017 P10.5 crx- retina GAGGCGCCTG (2) 3.7 0.0037 P10.5 crx- retina TGACCTCTAG (3) 1.9 0.0019 P10.5 crx+ retina AACCTTTCTC (2) 3.8 0.0038 P10.5 crx+ retina GGAACCAGCC (2) 3.8 0.0038 Adult retinal AACCTTTCTC (2) 1.9 0.0019 Adult retinal ACAGCTGCAG (2) 1.9 0.0019 Adult retinal GGAACCAGCC (2) 1.9 0.0019 Adult retinal TGACCTCTAG (3) 1.9 0.0019 ONL AACCTTTCTC (2) 3.8 0.0038 ONL ATTACCAGAG (2) 3.8 0.0038 ONL GGAACCAGCC (2) 1.9 0.0019 ONL TGTAGAGTGA (2) 1.9 0.0019