Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.287826	Sfrs9	splicing factor, arginine/serine rich 9	5		108014
Gene Ontology	membrane | mRNA processing | mRNA splice site selection | nuclear mRNA splicing, via spliceosome | nucleic acid binding | nucleus | pre-mRNA splicing factor activity | RNA binding | spliceosome complex | transport | transporter activity
Human Homolog	SFRS9[splicing factor, arginine/serine-rich 9]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 41 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGCTGCTCTG (2) 22.8 0.0228 P8 Cb GC AAGATGCAGC (2) 6.5 0.0065 P8 Cb GC GAATATGCTC (2) 1.6 0.0016 Cb medulloblastoma AAGATGCAGC (2) 2.3 0.0023 Cb medulloblastoma GGCTGCTCTG (2) 2.3 0.0023 P8 GC+1d culture GGCTGCTCTG (2) 11.4 0.0114 P8 GC+1d culture AAGATGCAGC (2) 3.4 0.0034 P8 GC+1d culture GAATATGCTC (2) 1.1 0.0011 P8 GC+SHH+1d culture GGCTGCTCTG (2) 18.7 0.0187 P8 GC+SHH+1d culture AAGATGCAGC (2) 5.9 0.0059 P8 GC+SHH+1d culture GAATATGCTC (2) 1.2 0.0012 3T3 fibroblasts GGCTGCTCTG (2) 35 0.035 E15 cortex GGCTGCTCTG (2) 49.5 0.0495 Hypothalamus GGCTGCTCTG (2) 7.2 0.0072 E12.5 retina GGCTGCTCTG (2) 30 0.03 E12.5 retina AAGATGCAGC (2) 7.5 0.0075 E14.5 retina GGCTGCTCTG (2) 51 0.051 E14.5 retina AAGATGCAGC (2) 9.1 0.0091 E16.5 retina GGCTGCTCTG (2) 41.7 0.0417 E16.5 retina AAGATGCAGC (2) 5.4 0.0054 E18.5 retina GGCTGCTCTG (2) 23.6 0.0236 E18.5 retina AAGATGCAGC (2) 9.1 0.0091 P0.5 retina GGCTGCTCTG (2) 21.6 0.0216 P0.5 retina AAGATGCAGC (2) 3.9 0.0039 P0.5 retina GAATATGCTC (2) 2 0.002 P2.5 retina GGCTGCTCTG (2) 21.1 0.0211 P2.5 retina GAATATGCTC (2) 3.5 0.0035 P4.5 retina GGCTGCTCTG (2) 23.8 0.0238 P4.5 retina AAGATGCAGC (2) 4 0.004 P4.5 retina GAATATGCTC (2) 2 0.002 P6.5 retina GGCTGCTCTG (2) 30 0.03 P6.5 retina AAGATGCAGC (2) 5 0.005 P10.5 crx- retina GGCTGCTCTG (2) 11.1 0.0111 P10.5 crx- retina AAGATGCAGC (2) 7.4 0.0074 P10.5 crx- retina GAATATGCTC (2) 1.9 0.0019 P10.5 crx+ retina GGCTGCTCTG (2) 25 0.025 P10.5 crx+ retina AAGATGCAGC (2) 1.9 0.0019 Adult retinal GGCTGCTCTG (2) 11.1 0.0111 Adult retinal AAGATGCAGC (2) 1.9 0.0019 ONL GGCTGCTCTG (2) 7.7 0.0077 ONL AAGATGCAGC (2) 1.9 0.0019