Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.289934
Chd8
chromodomain helicase DNA binding protein 8
14
67772
Mm.289934
AW549269
expressed sequence AW549269
14
105692
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 50 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCTATGAGAA
(
4
)
8.2
0.0082
P8 Cb GC
TGTTCCAGCC
(
3
)
1.6
0.0016
Cb medulloblastoma
GCTATGAGAA
(
4
)
6.9
0.0069
Cb medulloblastoma
AGGGCAGACC
(
2
)
4.6
0.0046
Cb medulloblastoma
AATTTGAAAG
(
3
)
2.3
0.0023
P8 GC+1d culture
GCTATGAGAA
(
4
)
14.8
0.0148
P8 GC+1d culture
TGTTCCAGCC
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
GCTATGAGAA
(
4
)
14.1
0.0141
P8 GC+SHH+1d culture
CTTCATCACC
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
CTTCATCATC
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
AGGGGGTGCT
(
2
)
1.2
0.0012
3T3 fibroblasts
TGTTCCAGCC
(
3
)
14
0.014
3T3 fibroblasts
AATTTGAAAG
(
3
)
3.5
0.0035
E15 cortex
AATTTGAAAG
(
3
)
9.9
0.0099
E15 cortex
GCTATGAGAA
(
4
)
9.9
0.0099
E15 cortex
AGGGCAGACC
(
2
)
4.9
0.0049
E15 cortex
TGTTCCAGCC
(
3
)
4.9
0.0049
P1 cortex
GCTATGAGAA
(
4
)
59.1
0.0591
Hypothalamus
GCTATGAGAA
(
4
)
21.7
0.0217
Hypothalamus
TGTTCCAGCC
(
3
)
1.8
0.0018
E12.5 retina
GCTATGAGAA
(
4
)
5.6
0.0056
E12.5 retina
AATTTGAAAG
(
3
)
1.9
0.0019
E12.5 retina
GATGAGAAAG
(
2
)
1.9
0.0019
E14.5 retina
CTTCATCATC
(
2
)
3.6
0.0036
E14.5 retina
AGGGGGTGCT
(
2
)
1.8
0.0018
E14.5 retina
GCTATGAGAA
(
4
)
1.8
0.0018
E16.5 retina
CTTCATCATC
(
2
)
5.4
0.0054
E16.5 retina
GCTATGAGAA
(
4
)
5.4
0.0054
E18.5 retina
GCTATGAGAA
(
4
)
5.5
0.0055
E18.5 retina
CTTCATCACC
(
2
)
1.8
0.0018
P0.5 retina
TGTTCCAGCC
(
3
)
7.9
0.0079
P0.5 retina
GCTATGAGAA
(
4
)
5.9
0.0059
P0.5 retina
AGGGGGTGCT
(
2
)
2
0.002
P0.5 retina
CTTCATCATC
(
2
)
2
0.002
P2.5 retina
GCTATGAGAA
(
4
)
3.5
0.0035
P2.5 retina
AGGGGGTGCT
(
2
)
1.8
0.0018
P4.5 retina
GCTATGAGAA
(
4
)
9.9
0.0099
P6.5 retina
GCTATGAGAA
(
4
)
6.7
0.0067
P6.5 retina
CTTCATCATC
(
2
)
5
0.005
P6.5 retina
GATGAGAAAG
(
2
)
1.7
0.0017
P10.5 crx- retina
GCTATGAGAA
(
4
)
7.4
0.0074
P10.5 crx- retina
CTTCATCACC
(
2
)
1.9
0.0019
P10.5 crx+ retina
GCTATGAGAA
(
4
)
7.7
0.0077
Adult retinal
GCTATGAGAA
(
4
)
9.3
0.0093
Adult retinal
AGGGGGTGCT
(
2
)
1.9
0.0019
Adult retinal
GATGAGAAAG
(
2
)
1.9
0.0019
Adult retinal
TGTTCCAGCC
(
3
)
1.9
0.0019
ONL
AATTTGAAAG
(
3
)
5.7
0.0057
ONL
GATGAGAAAG
(
2
)
3.8
0.0038
ONL
CTTCATCATC
(
2
)
1.9
0.0019
