Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.290407
Nap1l1
nucleosome assembly protein 1-like 1
10
10 60.0 cM
53605
Mm.290407
D10Ertd284e
DNA segment, Chr 10, ERATO Doi 284, expressed
10
10 60.0 cM
52558
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 75 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTGTTAGAGG
(
3
)
8.2
0.0082
P8 Cb GC
AGAGCTAAAA
(
2
)
3.3
0.0033
P8 Cb GC
AAGTTGCATT
(
4
)
1.6
0.0016
P8 Cb GC
ATGAACCTAT
(
3
)
1.6
0.0016
Cb medulloblastoma
AAGTTGCATT
(
4
)
4.6
0.0046
Cb medulloblastoma
GGATGCTGTC
(
4
)
2.3
0.0023
Cb medulloblastoma
TTTAGGCTAT
(
2
)
2.3
0.0023
P8 GC+1d culture
TTGTTAGAGG
(
3
)
6.8
0.0068
P8 GC+1d culture
AAGTTGCATT
(
4
)
5.7
0.0057
P8 GC+1d culture
ATGAACCTAT
(
3
)
4.6
0.0046
P8 GC+1d culture
AGAGCTAAAA
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
ATGAACCTAT
(
3
)
11.7
0.0117
P8 GC+SHH+1d culture
TTGTTAGAGG
(
3
)
10.5
0.0105
P8 GC+SHH+1d culture
AAGTTGCATT
(
4
)
3.5
0.0035
P8 GC+SHH+1d culture
GGATGCTGTC
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
ACTCATTTAC
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
AGAGCTAAAA
(
2
)
1.2
0.0012
3T3 fibroblasts
ATCTCGAGAG
(
3
)
31.5
0.0315
3T3 fibroblasts
TTGTTAGAGG
(
3
)
17.5
0.0175
E15 cortex
ATCTCGAGAG
(
3
)
4.9
0.0049
E15 cortex
ATGAACCTAT
(
3
)
4.9
0.0049
E15 cortex
GGATGCTGTC
(
4
)
4.9
0.0049
E15 cortex
TTGTTAGAGG
(
3
)
4.9
0.0049
P1 cortex
ATGAACCTAT
(
3
)
13.6
0.0136
P1 cortex
TTGTTAGAGG
(
3
)
9.1
0.0091
Hypothalamus
AAGTTGCATT
(
4
)
1.8
0.0018
Hypothalamus
TTGTTAGAGG
(
3
)
1.8
0.0018
E12.5 retina
TTGTTAGAGG
(
3
)
11.3
0.0113
E12.5 retina
AAGTTGCATT
(
4
)
3.8
0.0038
E12.5 retina
ATGAACCTAT
(
3
)
3.8
0.0038
E12.5 retina
AGAGCTAAAA
(
2
)
1.9
0.0019
E12.5 retina
ATCTCGAGAG
(
3
)
1.9
0.0019
E14.5 retina
ACTCATTTAC
(
2
)
1.8
0.0018
E14.5 retina
AGAGCTAAAA
(
2
)
1.8
0.0018
E16.5 retina
TTGTTAGAGG
(
3
)
7.2
0.0072
E16.5 retina
ATCTCGAGAG
(
3
)
1.8
0.0018
E16.5 retina
TTCATTTATT
(
3
)
1.8
0.0018
E18.5 retina
TTGTTAGAGG
(
3
)
5.5
0.0055
E18.5 retina
ACTCATTTAC
(
2
)
3.6
0.0036
E18.5 retina
AAGTTGCATT
(
4
)
1.8
0.0018
E18.5 retina
AGAGCTAAAA
(
2
)
1.8
0.0018
E18.5 retina
ATGAACCTAT
(
3
)
1.8
0.0018
E18.5 retina
TTCATTTATT
(
3
)
1.8
0.0018
P0.5 retina
TTGTTAGAGG
(
3
)
15.7
0.0157
P0.5 retina
AAGTTGCATT
(
4
)
9.8
0.0098
P0.5 retina
ATGAACCTAT
(
3
)
5.9
0.0059
P0.5 retina
AGAGCTAAAA
(
2
)
2
0.002
P0.5 retina
ATCTCGAGAG
(
3
)
2
0.002
P0.5 retina
TTTAGGCTAT
(
2
)
2
0.002
P2.5 retina
TTGTTAGAGG
(
3
)
3.5
0.0035
P2.5 retina
AAGTTGCATT
(
4
)
1.8
0.0018
P2.5 retina
AGAGCTAAAA
(
2
)
1.8
0.0018
P2.5 retina
ATGAACCTAT
(
3
)
1.8
0.0018
P2.5 retina
TTCATTTATT
(
3
)
1.8
0.0018
P4.5 retina
TTGTTAGAGG
(
3
)
5.9
0.0059
P4.5 retina
AAGTTGCATT
(
4
)
2
0.002
P4.5 retina
AGAGCTAAAA
(
2
)
2
0.002
P4.5 retina
TTCATTTATT
(
3
)
2
0.002
P6.5 retina
TTGTTAGAGG
(
3
)
6.7
0.0067
P6.5 retina
AAGTTGCATT
(
4
)
5
0.005
P6.5 retina
ATGAACCTAT
(
3
)
5
0.005
P6.5 retina
ATCTCGAGAG
(
3
)
3.3
0.0033
P6.5 retina
ACTCATTTAC
(
2
)
1.7
0.0017
P10.5 crx- retina
AAGTTGCATT
(
4
)
5.6
0.0056
P10.5 crx- retina
TTGTTAGAGG
(
3
)
3.7
0.0037
P10.5 crx+ retina
TTGTTAGAGG
(
3
)
5.8
0.0058
P10.5 crx+ retina
AAGTTGCATT
(
4
)
1.9
0.0019
P10.5 crx+ retina
ATCTCGAGAG
(
3
)
1.9
0.0019
P10.5 crx+ retina
ATGAACCTAT
(
3
)
1.9
0.0019
Adult retinal
AAGTTGCATT
(
4
)
1.9
0.0019
Adult retinal
ATGAACCTAT
(
3
)
1.9
0.0019
Adult retinal
TTGTTAGAGG
(
3
)
1.9
0.0019
ONL
AAGTTGCATT
(
4
)
5.7
0.0057
ONL
ATGAACCTAT
(
3
)
5.7
0.0057
ONL
TTCATTTATT
(
3
)
1.9
0.0019
