Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.290813	Fem1a	feminization 1 homolog a (C. elegans)	17	17 37.5 cM	14154
Gene Ontology	cellular_component unknown | DNA binding | regulation of transcription, DNA-dependent | transcription factor activity
Human Homolog	FEM1A[fem-1 homolog a (C.elegans)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 46 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTGCTGGCTT (5) 17.9 0.0179 P8 Cb GC AACCCCTTTG 1.6 0.0016 Cb medulloblastoma TTGCTGGCTT (5) 20.8 0.0208 P8 GC+1d culture TTGCTGGCTT (5) 36.5 0.0365 P8 GC+1d culture AACCCCTTTG 2.3 0.0023 P8 GC+1d culture GAGCCCTGGG 1.1 0.0011 P8 GC+SHH+1d culture TTGCTGGCTT (5) 23.4 0.0234 P8 GC+SHH+1d culture AACCCCTTTG 2.3 0.0023 P8 GC+SHH+1d culture AGGGGGTAAT 2.3 0.0023 3T3 fibroblasts TTGCTGGCTT (5) 14 0.014 E15 cortex TTGCTGGCTT (5) 29.7 0.0297 P1 cortex TTGCTGGCTT (5) 18.2 0.0182 P1 cortex AACCCCTTTG 9.1 0.0091 P1 cortex GACGCCGCCA 4.5 0.0045 P1 cortex GAGCCCTGGG 4.5 0.0045 Hypothalamus TTGCTGGCTT (5) 7.2 0.0072 Hypothalamus AACCCCTTTG 3.6 0.0036 E12.5 retina AACCCCTTTG 5.6 0.0056 E12.5 retina AGGGGGTAAT 1.9 0.0019 E12.5 retina GAGCCCTGGG 1.9 0.0019 E12.5 retina TTGCTGGCTT (5) 1.9 0.0019 E14.5 retina TTGCTGGCTT (5) 3.6 0.0036 E16.5 retina TTGCTGGCTT (5) 10.9 0.0109 E16.5 retina AACCCCTTTG 3.6 0.0036 E18.5 retina TTGCTGGCTT (5) 10.9 0.0109 E18.5 retina AACCCCTTTG 3.6 0.0036 P0.5 retina TTGCTGGCTT (5) 3.9 0.0039 P0.5 retina AACCCCTTTG 2 0.002 P0.5 retina AGGGGGTAAT 2 0.002 P2.5 retina TTGCTGGCTT (5) 12.3 0.0123 P2.5 retina AACCCCTTTG 1.8 0.0018 P4.5 retina GAGCCCTGGG 2 0.002 P4.5 retina TTGCTGGCTT (5) 2 0.002 P6.5 retina TTGCTGGCTT (5) 5 0.005 P6.5 retina AACCCCTTTG 3.3 0.0033 P6.5 retina AGGGGGTAAT 1.7 0.0017 P10.5 crx- retina TTGCTGGCTT (5) 14.9 0.0149 P10.5 crx- retina AACCCCTTTG 5.6 0.0056 P10.5 crx+ retina AACCCCTTTG 7.7 0.0077 P10.5 crx+ retina TTGCTGGCTT (5) 3.8 0.0038 P10.5 crx+ retina AGGGGGTAAT 1.9 0.0019 P10.5 crx+ retina GAGCCCTGGG 1.9 0.0019 Adult retinal TTGCTGGCTT (5) 5.6 0.0056 ONL GACGCCGCCA 7.7 0.0077 ONL TTGCTGGCTT (5) 3.8 0.0038 ONL GAGCCCTGGG 1.9 0.0019