Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.291750
1100001I22Rik
RIKEN cDNA 1100001I22 gene
3
68436
Gene Ontology
intracellular
|
protein biosynthesis
|
ribosome
|
structural constituent of ribosome
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 65 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGTGCCAAGT
(
2
)
114.2
0.1142
P8 Cb GC
CAGATTTAGG
(
2
)
13.1
0.0131
P8 Cb GC
TGGCGTGTGC
(
2
)
8.2
0.0082
P8 Cb GC
GAGCCGCCAT
(
2
)
1.6
0.0016
P8 Cb GC
TTTGCCAAGT
(
2
)
1.6
0.0016
Cb medulloblastoma
TGTGCCAAGT
(
2
)
20.8
0.0208
Cb medulloblastoma
GAGCCGCCAT
(
2
)
4.6
0.0046
Cb medulloblastoma
CAGATTTAGG
(
2
)
2.3
0.0023
P8 GC+1d culture
TGTGCCAAGT
(
2
)
86.8
0.0868
P8 GC+1d culture
CAGATTTAGG
(
2
)
2.3
0.0023
P8 GC+1d culture
GAGCCGCCAT
(
2
)
1.1
0.0011
P8 GC+1d culture
TGGCGTGTGC
(
2
)
1.1
0.0011
P8 GC+1d culture
TTTGCCAAGT
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
TGTGCCAAGT
(
2
)
77.3
0.0773
P8 GC+SHH+1d culture
CAGATTTAGG
(
2
)
7
0.007
P8 GC+SHH+1d culture
GAGCCGCCAT
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
TGGCGTGTGC
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
TGGTGTGTGC
(
2
)
1.2
0.0012
3T3 fibroblasts
TGTGCCAAGT
(
2
)
140.2
0.1402
E15 cortex
TGTGCCAAGT
(
2
)
79.2
0.0792
E15 cortex
TGGCGTGTGC
(
2
)
14.8
0.0148
E15 cortex
CAGATTTAGG
(
2
)
4.9
0.0049
P1 cortex
TGTGCCAAGT
(
2
)
59.1
0.0591
Hypothalamus
TGTGCCAAGT
(
2
)
59.8
0.0598
Hypothalamus
GAGCCGCCAT
(
2
)
3.6
0.0036
Hypothalamus
CAGATTTAGG
(
2
)
1.8
0.0018
Hypothalamus
TGGCGTGTGC
(
2
)
1.8
0.0018
E12.5 retina
TGTGCCAAGT
(
2
)
135.2
0.1352
E12.5 retina
CAGATTTAGG
(
2
)
13.1
0.0131
E12.5 retina
GAGCCGCCAT
(
2
)
3.8
0.0038
E14.5 retina
TGTGCCAAGT
(
2
)
36.4
0.0364
E14.5 retina
CAGATTTAGG
(
2
)
9.1
0.0091
E14.5 retina
GAGCCGCCAT
(
2
)
9.1
0.0091
E14.5 retina
TGGCGTGTGC
(
2
)
3.6
0.0036
E16.5 retina
TGTGCCAAGT
(
2
)
52.5
0.0525
E16.5 retina
CAGATTTAGG
(
2
)
10.9
0.0109
E16.5 retina
GAGCCGCCAT
(
2
)
7.2
0.0072
E16.5 retina
TGGCGTGTGC
(
2
)
1.8
0.0018
E18.5 retina
TGTGCCAAGT
(
2
)
90.9
0.0909
E18.5 retina
CAGATTTAGG
(
2
)
7.3
0.0073
E18.5 retina
GAGCCGCCAT
(
2
)
7.3
0.0073
E18.5 retina
TGGCGTGTGC
(
2
)
1.8
0.0018
E18.5 retina
TTTGCCAAGT
(
2
)
1.8
0.0018
P0.5 retina
TGTGCCAAGT
(
2
)
145.2
0.1452
P0.5 retina
GAGCCGCCAT
(
2
)
7.9
0.0079
P0.5 retina
CAGATTTAGG
(
2
)
3.9
0.0039
P2.5 retina
TGTGCCAAGT
(
2
)
82.7
0.0827
P2.5 retina
CAGATTTAGG
(
2
)
1.8
0.0018
P2.5 retina
GAGCCGCCAT
(
2
)
1.8
0.0018
P4.5 retina
TGTGCCAAGT
(
2
)
63.4
0.0634
P4.5 retina
GAGCCGCCAT
(
2
)
5.9
0.0059
P4.5 retina
CAGATTTAGG
(
2
)
2
0.002
P6.5 retina
TGTGCCAAGT
(
2
)
78.4
0.0784
P6.5 retina
CAGATTTAGG
(
2
)
1.7
0.0017
P6.5 retina
TGGTGTGTGC
(
2
)
1.7
0.0017
P10.5 crx- retina
TGTGCCAAGT
(
2
)
128.2
0.1282
P10.5 crx- retina
TGGCGTGTGC
(
2
)
7.4
0.0074
P10.5 crx- retina
GAGCCGCCAT
(
2
)
1.9
0.0019
P10.5 crx- retina
TGGTGTGTGC
(
2
)
1.9
0.0019
P10.5 crx+ retina
TGTGCCAAGT
(
2
)
92.3
0.0923
P10.5 crx+ retina
GAGCCGCCAT
(
2
)
1.9
0.0019
P10.5 crx+ retina
TGGCGTGTGC
(
2
)
1.9
0.0019
Adult retinal
TGTGCCAAGT
(
2
)
44.4
0.0444
ONL
TGTGCCAAGT
(
2
)
15.3
0.0153
ONL
CAGATTTAGG
(
2
)
1.9
0.0019
