Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.294770
1500002C15Rik
RIKEN cDNA 1500002C15 gene
4
68946
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 59 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCCTGCCCTG
(
2
)
13.1
0.0131
P8 Cb GC
GCCTCCCCTG
(
3
)
3.3
0.0033
P8 Cb GC
CACCGAGCAC
1.6
0.0016
Cb medulloblastoma
CCCTGCACAG
(
2
)
6.9
0.0069
Cb medulloblastoma
GCCTGCCCTG
(
2
)
4.6
0.0046
P8 GC+1d culture
GCCTGCCCTG
(
2
)
17.1
0.0171
P8 GC+1d culture
CCCTGCACAG
(
2
)
9.1
0.0091
P8 GC+1d culture
GCCTCCCCTG
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
CCCTGCACAG
(
2
)
10.5
0.0105
P8 GC+SHH+1d culture
GCCTGCCCTG
(
2
)
5.9
0.0059
P8 GC+SHH+1d culture
GAAGCACACA
1.2
0.0012
3T3 fibroblasts
CCCTGCACAG
(
2
)
14
0.014
3T3 fibroblasts
GCCTCCCCTG
(
3
)
14
0.014
3T3 fibroblasts
GCCTGCCCTG
(
2
)
10.5
0.0105
P1 cortex
GCCTCCCCTG
(
3
)
4.5
0.0045
P1 cortex
GCCTGCCCTG
(
2
)
4.5
0.0045
Hypothalamus
GCCTGCCCTG
(
2
)
10.9
0.0109
Hypothalamus
AAGAGGCCAC
3.6
0.0036
Hypothalamus
CCCTGCACAG
(
2
)
1.8
0.0018
E12.5 retina
CCCTGCACAG
(
2
)
3.8
0.0038
E12.5 retina
GCCTGCCCTG
(
2
)
1.9
0.0019
E14.5 retina
GCCTGCCCTG
(
2
)
14.6
0.0146
E14.5 retina
CCCTGCACAG
(
2
)
3.6
0.0036
E14.5 retina
AAGAGGCCAC
1.8
0.0018
E16.5 retina
CCCTGCACAG
(
2
)
9.1
0.0091
E16.5 retina
GCCTGCCCTG
(
2
)
9.1
0.0091
E16.5 retina
AAGAGGCCAC
3.6
0.0036
E16.5 retina
CACCGAGCAC
1.8
0.0018
E16.5 retina
GAAGCACACA
1.8
0.0018
E16.5 retina
GCCTCCCCTG
(
3
)
1.8
0.0018
E18.5 retina
GCCTGCCCTG
(
2
)
10.9
0.0109
E18.5 retina
CCCTGCACAG
(
2
)
3.6
0.0036
E18.5 retina
GAAGCACACA
1.8
0.0018
P0.5 retina
GCCTGCCCTG
(
2
)
11.8
0.0118
P0.5 retina
CCCTGCACAG
(
2
)
3.9
0.0039
P0.5 retina
GCCTCCCCTG
(
3
)
3.9
0.0039
P2.5 retina
GCCTGCCCTG
(
2
)
5.3
0.0053
P2.5 retina
AAGAGGCCAC
1.8
0.0018
P2.5 retina
CCCTGCACAG
(
2
)
1.8
0.0018
P4.5 retina
CCCTGCACAG
(
2
)
5.9
0.0059
P4.5 retina
GCCTGCCCTG
(
2
)
4
0.004
P6.5 retina
GCCTGCCCTG
(
2
)
25
0.025
P6.5 retina
CCCTGCACAG
(
2
)
3.3
0.0033
P6.5 retina
GAAGCACACA
1.7
0.0017
P10.5 crx- retina
GCCTGCCCTG
(
2
)
48.3
0.0483
P10.5 crx- retina
CCCTGCACAG
(
2
)
7.4
0.0074
P10.5 crx- retina
GCCTCCCCTG
(
3
)
5.6
0.0056
P10.5 crx- retina
AAGAGGCCAC
3.7
0.0037
P10.5 crx- retina
CACCGAGCAC
1.9
0.0019
P10.5 crx+ retina
GCCTGCCCTG
(
2
)
78.8
0.0788
P10.5 crx+ retina
CCCTGCACAG
(
2
)
5.8
0.0058
P10.5 crx+ retina
GCCTCCCCTG
(
3
)
5.8
0.0058
P10.5 crx+ retina
AAGAGGCCAC
3.8
0.0038
P10.5 crx+ retina
CACCGAGCAC
1.9
0.0019
Adult retinal
GCCTGCCCTG
(
2
)
42.6
0.0426
Adult retinal
CCCTGCACAG
(
2
)
11.1
0.0111
Adult retinal
GCCTCCCCTG
(
3
)
1.9
0.0019
ONL
GCCTGCCCTG
(
2
)
19.2
0.0192
ONL
CCCTGCACAG
(
2
)
3.8
0.0038
