Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.295263	AI836758	expressed sequence AI836758	3		99719
Mm.295263	2810480F11Rik	RIKEN cDNA 2810480F11 gene	3		72806
Mm.295263	9430012M22Rik	RIKEN cDNA 9430012M22 gene	3		77244
Mm.295263	Dcamkl1	double cortin and calcium/calmodulin-dependent protein kinase-like 1	3	3 C	13175
Gene Ontology	ATP binding | intracellular signaling cascade | kinase activity | neurogenesis | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | transferase activity
Human Homolog	DCAMKL1[doublecortin and CaM kinase-like 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 6 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 63 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TACTGATCTA (4) 9.8 0.0098 P8 Cb GC GAAACACGAA (4) 3.3 0.0033 P8 Cb GC TAATAAACAG (4) 3.3 0.0033 P8 Cb GC CAATAAAAAT (5) 1.6 0.0016 P8 Cb GC TACACTGAGC (4) 1.6 0.0016 P8 Cb GC TCAAACACAA (4) 1.6 0.0016 P8 Cb GC TGGTGTTTGT (5) 1.6 0.0016 P8 Cb GC TTCTTAAACT (4) 1.6 0.0016 Cb medulloblastoma ATCAATAAAT (5) 6.9 0.0069 Cb medulloblastoma TTCTTAAACT (4) 4.6 0.0046 Cb medulloblastoma CAATAAAAAT (5) 2.3 0.0023 Cb medulloblastoma TAATAAACAG (4) 2.3 0.0023 Cb medulloblastoma TGGTGTTTGT (5) 2.3 0.0023 P8 GC+1d culture TTCTTAAACT (4) 8 0.008 P8 GC+1d culture CAATAAAAAT (5) 3.4 0.0034 P8 GC+1d culture GAAACACGAA (4) 2.3 0.0023 P8 GC+1d culture TAATAAACAG (4) 2.3 0.0023 P8 GC+1d culture ATCAATAAAT (5) 1.1 0.0011 P8 GC+1d culture TACACTGAGC (4) 1.1 0.0011 P8 GC+1d culture TACTGATCTA (4) 1.1 0.0011 P8 GC+SHH+1d culture TAATAAACAG (4) 12.9 0.0129 P8 GC+SHH+1d culture TTCTTAAACT (4) 3.5 0.0035 P8 GC+SHH+1d culture CAATAAAAAT (5) 2.3 0.0023 P8 GC+SHH+1d culture GAAACACGAA (4) 1.2 0.0012 P8 GC+SHH+1d culture TACACTGAGC (4) 1.2 0.0012 P8 GC+SHH+1d culture TACTGATCTA (4) 1.2 0.0012 3T3 fibroblasts GAAACACGAA (4) 3.5 0.0035 P1 cortex TTCTTAAACT (4) 13.6 0.0136 P1 cortex TACTGATCTA (4) 9.1 0.0091 Hypothalamus TACTGATCTA (4) 5.4 0.0054 Hypothalamus TAATAAACAG (4) 3.6 0.0036 Hypothalamus TTCTTAAACT (4) 3.6 0.0036 Hypothalamus ATCAATAAAT (5) 1.8 0.0018 Hypothalamus CAATAAAAAT (5) 1.8 0.0018 E12.5 retina TAATAAACAG (4) 9.4 0.0094 E12.5 retina GAAACACGAA (4) 1.9 0.0019 E14.5 retina ATCAATAAAT (5) 1.8 0.0018 E14.5 retina CAATAAAAAT (5) 1.8 0.0018 E14.5 retina TTCTTAAACT (4) 1.8 0.0018 E16.5 retina ATCAATAAAT (5) 7.2 0.0072 E16.5 retina TAATAAACAG (4) 3.6 0.0036 E18.5 retina TTCTTAAACT (4) 9.1 0.0091 E18.5 retina CAATAAAAAT (5) 1.8 0.0018 P0.5 retina TAATAAACAG (4) 3.9 0.0039 P2.5 retina CAATAAAAAT (5) 1.8 0.0018 P2.5 retina GAAACACGAA (4) 1.8 0.0018 P2.5 retina TAATAAACAG (4) 1.8 0.0018 P2.5 retina TCAAACACAA (4) 1.8 0.0018 P2.5 retina TGGTGTTTGT (5) 1.8 0.0018 P4.5 retina TAATAAACAG (4) 4 0.004 P4.5 retina TACTGATCTA (4) 2 0.002 P4.5 retina TTCTTAAACT (4) 2 0.002 P6.5 retina ATCAATAAAT (5) 1.7 0.0017 P10.5 crx- retina TAATAAACAG (4) 1.9 0.0019 P10.5 crx- retina TCAAACACAA (4) 1.9 0.0019 P10.5 crx+ retina TTCTTAAACT (4) 5.8 0.0058 P10.5 crx+ retina GAAACACGAA (4) 1.9 0.0019 P10.5 crx+ retina TAATAAACAG (4) 1.9 0.0019 Adult retinal CAATAAAAAT (5) 1.9 0.0019 Adult retinal TACACTGAGC (4) 1.9 0.0019 ONL ATCAATAAAT (5) 1.9 0.0019 ONL CAATAAAAAT (5) 1.9 0.0019 ONL TTCTTAAACT (4) 1.9 0.0019