Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.29584	Mthfd1	methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase	12		108156
Gene Ontology	amino acid biosynthesis | ATP binding | catalytic activity | folic acid and derivative biosynthesis | formate-tetrahydrofolate ligase activity | formyltetrahydrofolate dehydrogenase activity | histidine biosynthesis | histidine catabolism | hydrolase activity | ligase activity | methenyltetrahydrofolate cyclohydrolase activity | methionine biosynthesis | methylenetetrahydrofolate dehydrogenase (NADP+) activity | one-carbon compound metabolism | oxidoreductase activity | purine nucleotide biosynthesis
Human Homolog	MTHFD1[methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 30 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCTATTTACA (2) 1.6 0.0016 Cb medulloblastoma TCTATTTACA (2) 4.6 0.0046 Cb medulloblastoma AAATGAATTA (2) 2.3 0.0023 Cb medulloblastoma GCAGTCCTGG 2.3 0.0023 P8 GC+1d culture AAATGAATTA (2) 2.3 0.0023 P8 GC+1d culture TCTATTTACA (2) 1.1 0.0011 P8 GC+SHH+1d culture TATAAATTAA 1.2 0.0012 P8 GC+SHH+1d culture TCTATTTACA (2) 1.2 0.0012 P1 cortex GCAGTCCTGG 4.5 0.0045 P1 cortex TCTATTTACA (2) 4.5 0.0045 Hypothalamus AAATGAATTA (2) 1.8 0.0018 E12.5 retina TCTATTTACA (2) 5.6 0.0056 E12.5 retina CACACCCAAG 3.8 0.0038 E14.5 retina TCTATTTACA (2) 5.5 0.0055 E14.5 retina TATAAATTAA 3.6 0.0036 E16.5 retina TCTATTTACA (2) 9.1 0.0091 E16.5 retina TATAAATTAA 1.8 0.0018 E18.5 retina TATAAATTAA 1.8 0.0018 P0.5 retina CACACCCAAG 2 0.002 P2.5 retina AAATGAATTA (2) 1.8 0.0018 P2.5 retina GCAGTCCTGG 1.8 0.0018 P2.5 retina TCTATTTACA (2) 1.8 0.0018 P4.5 retina TATAAATTAA 2 0.002 P4.5 retina TCTATTTACA (2) 2 0.002 P10.5 crx- retina TCTATTTACA (2) 1.9 0.0019 P10.5 crx+ retina AAATGAATTA (2) 1.9 0.0019 P10.5 crx+ retina TATAAATTAA 1.9 0.0019 Adult retinal GCAGTCCTGG 1.9 0.0019 Adult retinal TCTATTTACA (2) 1.9 0.0019 ONL TATAAATTAA 1.9 0.0019