Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.296008
BC023814
cDNA sequence BC023814
3
229503
Human Homolog
CGI-41[CGI-41 protein]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 40 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGGATCCAGG
(
2
)
8.2
0.0082
P8 Cb GC
CAGTCAAAAC
(
3
)
4.9
0.0049
P8 Cb GC
TTTCAGGGAC
(
2
)
1.6
0.0016
Cb medulloblastoma
CAGTCAAAAC
(
3
)
6.9
0.0069
P8 GC+1d culture
GGGATCCAGG
(
2
)
8
0.008
P8 GC+1d culture
TTTCAGGGAC
(
2
)
2.3
0.0023
P8 GC+1d culture
CAGTCAAAAC
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
GGGATCCAGG
(
2
)
8.2
0.0082
P8 GC+SHH+1d culture
CAGTCAAAAC
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
TTTCAGGGAC
(
2
)
1.2
0.0012
3T3 fibroblasts
GGGATCCAGG
(
2
)
10.5
0.0105
E15 cortex
GGGATCCAGG
(
2
)
14.8
0.0148
P1 cortex
GGGATCCAGG
(
2
)
4.5
0.0045
Hypothalamus
GGGATCCAGG
(
2
)
7.2
0.0072
Hypothalamus
CAGTCAAAAC
(
3
)
1.8
0.0018
E12.5 retina
GGGATCCAGG
(
2
)
15
0.015
E12.5 retina
CAGTCAAAAC
(
3
)
3.8
0.0038
E14.5 retina
GGGATCCAGG
(
2
)
5.5
0.0055
E14.5 retina
CAGTCAAAAC
(
3
)
3.6
0.0036
E14.5 retina
TTTCAGGGAC
(
2
)
1.8
0.0018
E16.5 retina
CAGTCAAAAC
(
3
)
1.8
0.0018
E16.5 retina
GGGATCCAGG
(
2
)
1.8
0.0018
E18.5 retina
GGGATCCAGG
(
2
)
9.1
0.0091
E18.5 retina
CAGTCAAAAC
(
3
)
1.8
0.0018
E18.5 retina
TTTCAGGGAC
(
2
)
1.8
0.0018
P0.5 retina
GGGATCCAGG
(
2
)
15.7
0.0157
P0.5 retina
CAGTCAAAAC
(
3
)
2
0.002
P0.5 retina
TTTCAGGGAC
(
2
)
2
0.002
P2.5 retina
GGGATCCAGG
(
2
)
21.1
0.0211
P4.5 retina
GGGATCCAGG
(
2
)
17.8
0.0178
P4.5 retina
CAGTCAAAAC
(
3
)
2
0.002
P6.5 retina
GGGATCCAGG
(
2
)
10
0.01
P6.5 retina
TTTCAGGGAC
(
2
)
1.7
0.0017
P10.5 crx- retina
GGGATCCAGG
(
2
)
13
0.013
P10.5 crx- retina
CAGTCAAAAC
(
3
)
3.7
0.0037
P10.5 crx+ retina
GGGATCCAGG
(
2
)
19.2
0.0192
P10.5 crx+ retina
CAGTCAAAAC
(
3
)
1.9
0.0019
Adult retinal
GGGATCCAGG
(
2
)
3.7
0.0037
ONL
CAGTCAAAAC
(
3
)
7.7
0.0077
ONL
GGGATCCAGG
(
2
)
5.7
0.0057
