Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.297096	Mdh2	malate dehydrogenase 2, NAD (mitochondrial)	5	5 78.0 cM	17448
Gene Ontology	L-malate dehydrogenase activity | malate dehydrogenase activity | malic enzyme activity | mitochondrion | mitochondrion | oxidoreductase activity | tricarboxylic acid cycle
Human Homolog	MDH2[malate dehydrogenase 2, NAD (mitochondrial)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 58 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCTTTGGAAC 35.9 0.0359 P8 Cb GC GAACGGGGAA 13.1 0.0131 Cb medulloblastoma TCTTTGGAAC 37 0.037 Cb medulloblastoma GAACGGGGAA 13.9 0.0139 Cb medulloblastoma AACGGGAAGG 2.3 0.0023 Cb medulloblastoma TTCTTGACAA 2.3 0.0023 P8 GC+1d culture GAACGGGGAA 41.1 0.0411 P8 GC+1d culture TCTTTGGAAC 34.2 0.0342 P8 GC+1d culture AACGGGAAGG 1.1 0.0011 P8 GC+1d culture AAGTGAGAGG 1.1 0.0011 P8 GC+1d culture GCGTCCACGA (2) 1.1 0.0011 P8 GC+SHH+1d culture GAACGGGGAA 69.1 0.0691 P8 GC+SHH+1d culture TCTTTGGAAC 26.9 0.0269 P8 GC+SHH+1d culture TCTGTGGAAC 1.2 0.0012 P8 GC+SHH+1d culture TTCTTGACAA 1.2 0.0012 P8 GC+SHH+1d culture TTTTTGGAAC (3) 1.2 0.0012 3T3 fibroblasts TCATTGGAAC (2) 21 0.021 3T3 fibroblasts TTCTTGACAA 3.5 0.0035 E15 cortex TCTTTGGAAC 14.8 0.0148 P1 cortex TCTTTGGAAC 13.6 0.0136 Hypothalamus GAACGGGGAA 39.8 0.0398 Hypothalamus TCTTTGGAAC 29 0.029 Hypothalamus AAGTGAGAGG 1.8 0.0018 Hypothalamus ATGCTGAATA (2) 1.8 0.0018 Hypothalamus TTCTTGACAA 1.8 0.0018 E12.5 retina TCTTTGGAAC 18.8 0.0188 E14.5 retina TCTTTGGAAC 14.6 0.0146 E14.5 retina ATGCTGAATA (2) 3.6 0.0036 E16.5 retina TCTTTGGAAC 30.8 0.0308 E16.5 retina ATGCTGAATA (2) 5.4 0.0054 E16.5 retina TCTTTGGACC 1.8 0.0018 E18.5 retina TCTTTGGAAC 16.4 0.0164 P0.5 retina TCTTTGGAAC 25.5 0.0255 P0.5 retina GCGTCCACGA (2) 2 0.002 P0.5 retina TCTGTGGAAC 2 0.002 P2.5 retina TCTTTGGAAC 22.9 0.0229 P2.5 retina TCTGTGGAAC 1.8 0.0018 P4.5 retina TCTTTGGAAC 15.9 0.0159 P4.5 retina ATGCTGAATA (2) 4 0.004 P6.5 retina TCTTTGGAAC 21.7 0.0217 P6.5 retina AACGGGAAGG 1.7 0.0017 P10.5 crx- retina TCTTTGGAAC 74.3 0.0743 P10.5 crx- retina AAGTGAGAGG 3.7 0.0037 P10.5 crx- retina ATGCTGAATA (2) 1.9 0.0019 P10.5 crx- retina GAACGGGGAA 1.9 0.0019 P10.5 crx- retina TCTTTGGACC 1.9 0.0019 P10.5 crx+ retina TCTTTGGAAC 25 0.025 P10.5 crx+ retina AACGGGAAGG 1.9 0.0019 P10.5 crx+ retina AAGTGAGAGG 1.9 0.0019 P10.5 crx+ retina TTCTTGACAA 1.9 0.0019 Adult retinal TCTTTGGAAC 25.9 0.0259 Adult retinal AACGGGAAGG 13 0.013 Adult retinal GCGTCCACGA (2) 1.9 0.0019 Adult retinal TCTTTGGACC 1.9 0.0019 ONL TCTTTGGAAC 11.5 0.0115 ONL AACGGGAAGG 7.7 0.0077 ONL TCTTTGGGAC 1.9 0.0019 ONL TTTTTGGAAC (3) 1.9 0.0019