Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.297196	2810055E05Rik	RIKEN cDNA 2810055E05 gene	4		230780
Gene Ontology	cytosolic large ribosomal subunit (sensu Eukarya) | nucleic acid binding | nucleolus | RNA binding | RNA binding
Human Homolog	PS1D[putative S1 RNA binding domain protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 47 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAGCCAGGTG 3.3 0.0033 P8 Cb GC CGCTCAGTGT 3.3 0.0033 Cb medulloblastoma GAGAACTTGC (2) 9.2 0.0092 Cb medulloblastoma CAGCCAGGTG 4.6 0.0046 P8 GC+1d culture GAGAACTTGC (2) 6.8 0.0068 P8 GC+SHH+1d culture GAGAACTTGC (2) 7 0.007 P8 GC+SHH+1d culture CTGGAGCCCC (2) 2.3 0.0023 P8 GC+SHH+1d culture ATTTTCCCTT 1.2 0.0012 3T3 fibroblasts CTGGAGCCCC (2) 17.5 0.0175 3T3 fibroblasts CAGCCAGGTG 3.5 0.0035 3T3 fibroblasts GAGAACTTGC (2) 3.5 0.0035 E15 cortex CAGCCAGGTG 9.9 0.0099 E15 cortex CGCTCAGTGT 4.9 0.0049 E15 cortex CTGGAGCCCC (2) 4.9 0.0049 E15 cortex GAGAACTTGC (2) 4.9 0.0049 P1 cortex CTGGAGCCCC (2) 9.1 0.0091 P1 cortex CAGCCAGGTG 4.5 0.0045 P1 cortex GAGAACTTGC (2) 4.5 0.0045 Hypothalamus CAGCCAGGTG 5.4 0.0054 Hypothalamus GAGAACTTGC (2) 3.6 0.0036 Hypothalamus CTGGAGCCCC (2) 1.8 0.0018 E12.5 retina ATTTTCCCTT 1.9 0.0019 E14.5 retina CAGCCAGGTG 3.6 0.0036 E14.5 retina ATTTTCCCTT 1.8 0.0018 E14.5 retina GAGAACTTGC (2) 1.8 0.0018 E16.5 retina CAGCCAGGTG 3.6 0.0036 E16.5 retina GAGAACTTGC (2) 3.6 0.0036 E16.5 retina CGCTCAGTGT 1.8 0.0018 E18.5 retina GAGAACTTGC (2) 7.3 0.0073 E18.5 retina CAGCCAGGTG 1.8 0.0018 E18.5 retina CTGGAGCCCC (2) 1.8 0.0018 P0.5 retina CTGGAGCCCC (2) 5.9 0.0059 P0.5 retina CAGCCAGGTG 3.9 0.0039 P0.5 retina GAGAACTTGC (2) 3.9 0.0039 P2.5 retina GAGAACTTGC (2) 5.3 0.0053 P2.5 retina CGCTCAGTGT 1.8 0.0018 P4.5 retina GAGAACTTGC (2) 4 0.004 P4.5 retina CAGCCAGGTG 2 0.002 P4.5 retina CTGGAGCCCC (2) 2 0.002 P6.5 retina GAGAACTTGC (2) 10 0.01 P6.5 retina CTGGAGCCCC (2) 6.7 0.0067 P6.5 retina CAGCCAGGTG 3.3 0.0033 P10.5 crx- retina CCACCCAGGT 5.6 0.0056 P10.5 crx- retina GAGAACTTGC (2) 1.9 0.0019 P10.5 crx+ retina GAGAACTTGC (2) 7.7 0.0077 P10.5 crx+ retina CAGCCAGGTG 5.8 0.0058 P10.5 crx+ retina CTGGAGCCCC (2) 3.8 0.0038