Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.298456	Tdg	thymine DNA glycosylase	10	10 43.0 cM	21665
Gene Ontology	carbohydrate metabolism | DNA repair | hydrolase activity | hydrolase activity, acting on glycosyl bonds | nucleus | protein targeting
Human Homolog	TDG[thymine-DNA glycosylase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 39 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCAGGGTGGG 37.5 0.0375 P8 Cb GC CGCAGTCTGA 3.3 0.0033 P8 Cb GC ACTTGTGCAC 1.6 0.0016 P8 Cb GC CCTTTAGCTG 1.6 0.0016 Cb medulloblastoma GCAGGGTGGG 23.1 0.0231 P8 GC+1d culture GCAGGGTGGG 45.7 0.0457 P8 GC+1d culture ACTTGTGCAC 3.4 0.0034 P8 GC+1d culture TGAGTAATCA 2.3 0.0023 P8 GC+1d culture CGCAGTCTGA 1.1 0.0011 P8 GC+SHH+1d culture GCAGGGTGGG 52.7 0.0527 P8 GC+SHH+1d culture ACTTGTGCAC 2.3 0.0023 P8 GC+SHH+1d culture TGAGTAATCA 1.2 0.0012 3T3 fibroblasts GCAGGGTGGG 10.5 0.0105 E15 cortex GCAGGGTGGG 34.6 0.0346 P1 cortex GCAGGGTGGG 22.7 0.0227 Hypothalamus GCAGGGTGGG 7.2 0.0072 Hypothalamus CGCAGTCTGA 1.8 0.0018 E12.5 retina GCAGGGTGGG 37.5 0.0375 E12.5 retina ACTTGTGCAC 3.8 0.0038 E12.5 retina CGCAGTCTGA 3.8 0.0038 E14.5 retina GCAGGGTGGG 43.7 0.0437 E14.5 retina CGCAGTCTGA 1.8 0.0018 E16.5 retina GCAGGGTGGG 32.6 0.0326 E18.5 retina GCAGGGTGGG 49.1 0.0491 P0.5 retina GCAGGGTGGG 47.1 0.0471 P2.5 retina GCAGGGTGGG 88 0.088 P4.5 retina GCAGGGTGGG 71.3 0.0713 P4.5 retina ACTTGTGCAC 2 0.002 P6.5 retina GCAGGGTGGG 41.7 0.0417 P6.5 retina CCTTTAGCTG 1.7 0.0017 P6.5 retina CGCAGTCTGA 1.7 0.0017 P10.5 crx- retina GCAGGGTGGG 3.7 0.0037 P10.5 crx+ retina GCAGGGTGGG 38.4 0.0384 P10.5 crx+ retina CGCAGTCTGA 3.8 0.0038 P10.5 crx+ retina ACTTGTGCAC 1.9 0.0019 Adult retinal GCAGGGTGGG 7.4 0.0074 Adult retinal CCTTTAGCTG 1.9 0.0019 ONL CCTTTAGCTG 1.9 0.0019 ONL GCAGGGTGGG 1.9 0.0019