Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.299312	Ssfa1	sperm specific antigen 1	15		20826
Gene Ontology	fertilization (sensu Animalia) | nucleus | plasma membrane | protein biosynthesis | ribosome | RNA binding | spliceosome complex | structural constituent of ribosome
Human Homolog	NHP2L1[NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 39 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTCATTATTG 13.1 0.0131 P8 Cb GC TACTATTTTC (2) 4.9 0.0049 Cb medulloblastoma TTCATTATTG 13.9 0.0139 Cb medulloblastoma TACTATTTTC (2) 2.3 0.0023 Cb medulloblastoma TGAGGGAGAA 2.3 0.0023 P8 GC+1d culture TTCATTATTG 14.8 0.0148 P8 GC+1d culture TACTATTTTC (2) 3.4 0.0034 P8 GC+1d culture TGAGGGAGAA 1.1 0.0011 P8 GC+SHH+1d culture TTCATTATTG 10.5 0.0105 P8 GC+SHH+1d culture TACTATTTTC (2) 4.7 0.0047 P8 GC+SHH+1d culture TGAGGGAGAA 1.2 0.0012 P1 cortex TTCATTATTG 4.5 0.0045 Hypothalamus TTCATTATTG 23.5 0.0235 Hypothalamus TACTATTTTC (2) 3.6 0.0036 Hypothalamus TGAGGGAGAA 3.6 0.0036 E12.5 retina TTCATTATTG 30 0.03 E12.5 retina TACTATTTTC (2) 11.3 0.0113 E14.5 retina TTCATTATTG 14.6 0.0146 E14.5 retina TACTATTTTC (2) 1.8 0.0018 E16.5 retina TTCATTATTG 16.3 0.0163 E16.5 retina TACTATTTTC (2) 1.8 0.0018 E18.5 retina TTCATTATTG 23.6 0.0236 E18.5 retina TACTATTTTC (2) 12.7 0.0127 P0.5 retina TTCATTATTG 3.9 0.0039 P2.5 retina TTCATTATTG 12.3 0.0123 P2.5 retina TACTATTTTC (2) 8.8 0.0088 P4.5 retina TTCATTATTG 7.9 0.0079 P4.5 retina TACTATTTTC (2) 2 0.002 P6.5 retina TTCATTATTG 5 0.005 P10.5 crx- retina TTCATTATTG 14.9 0.0149 P10.5 crx- retina TACTATTTTC (2) 5.6 0.0056 P10.5 crx- retina TAACTACAAC 3.7 0.0037 P10.5 crx- retina TGAGGGAGAA 1.9 0.0019 P10.5 crx+ retina TACTATTTTC (2) 5.8 0.0058 P10.5 crx+ retina TTCATTATTG 5.8 0.0058 P10.5 crx+ retina TAACTACAAC 3.8 0.0038 Adult retinal TTCATTATTG 5.6 0.0056 ONL TTCATTATTG 3.8 0.0038 ONL TACTATTTTC (2) 1.9 0.0019