Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.299398	Hspd1	heat shock protein 1 (chaperonin)	1		15510
Gene Ontology	ATP binding | chaperone activity | mitochondrion | protein folding | response to heat | response to unfolded protein
Human Homolog	HSPD1[heat shock 60kDa protein 1 (chaperonin)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 70 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGAGTTCAGA 9.8 0.0098 P8 Cb GC CCTACAGATA 4.9 0.0049 P8 Cb GC TGGTGAAAAA (2) 3.3 0.0033 P8 Cb GC TGGTGACACA 1.6 0.0016 Cb medulloblastoma AGAGTTCAGA 16.2 0.0162 Cb medulloblastoma TGGTGAAAAA (2) 6.9 0.0069 Cb medulloblastoma CCTACAGATA 4.6 0.0046 Cb medulloblastoma CCACCCATTG 2.3 0.0023 Cb medulloblastoma GACAATGACA 2.3 0.0023 Cb medulloblastoma TGGTGACACA 2.3 0.0023 P8 GC+1d culture AGAGTTCAGA 10.3 0.0103 P8 GC+1d culture TGGTGAAAAA (2) 4.6 0.0046 P8 GC+1d culture CCTACAGATA 3.4 0.0034 P8 GC+1d culture GACAATGACA 1.1 0.0011 P8 GC+SHH+1d culture AGAGTTCAGA 9.4 0.0094 P8 GC+SHH+1d culture TGGTGAAAAA (2) 5.9 0.0059 P8 GC+SHH+1d culture CCTACAGATA 4.7 0.0047 P8 GC+SHH+1d culture CCACCCATTG 1.2 0.0012 P8 GC+SHH+1d culture TGGTGACACA 1.2 0.0012 3T3 fibroblasts AGAGTTCAGA 14 0.014 E15 cortex TGGTGAAAAA (2) 4.9 0.0049 Hypothalamus TGGTGAAAAA (2) 10.9 0.0109 Hypothalamus AGAGTTCAGA 5.4 0.0054 Hypothalamus CCTACAGATA 1.8 0.0018 E12.5 retina AGAGTTCAGA 48.8 0.0488 E12.5 retina CCTACAGATA 5.6 0.0056 E12.5 retina TGGTGACACA 3.8 0.0038 E12.5 retina GACAATGACA 1.9 0.0019 E12.5 retina TGGTGAAAAA (2) 1.9 0.0019 E14.5 retina AGAGTTCAGA 18.2 0.0182 E14.5 retina TGGTGAAAAA (2) 9.1 0.0091 E14.5 retina GACAATGACA 5.5 0.0055 E14.5 retina CCTACAGATA 1.8 0.0018 E14.5 retina TGGTGACACA 1.8 0.0018 E16.5 retina AGAGTTCAGA 16.3 0.0163 E16.5 retina TGGTGAAAAA (2) 7.2 0.0072 E16.5 retina CCTACAGATA 3.6 0.0036 E16.5 retina GACAATGACA 1.8 0.0018 E16.5 retina TGGTGACACA 1.8 0.0018 E18.5 retina AGAGTTCAGA 10.9 0.0109 E18.5 retina TGGTGAAAAA (2) 10.9 0.0109 E18.5 retina CCTACAGATA 7.3 0.0073 E18.5 retina TGGTGACACA 3.6 0.0036 E18.5 retina GACAATGACA 1.8 0.0018 P0.5 retina AGAGTTCAGA 7.9 0.0079 P0.5 retina AGCTTGAACA 2 0.002 P0.5 retina CCTACAGATA 2 0.002 P2.5 retina AGAGTTCAGA 8.8 0.0088 P2.5 retina CCTACAGATA 1.8 0.0018 P2.5 retina TGGTGACACA 1.8 0.0018 P4.5 retina AGAGTTCAGA 5.9 0.0059 P4.5 retina TGGTGAAAAA (2) 2 0.002 P6.5 retina AGAGTTCAGA 6.7 0.0067 P6.5 retina TGGTGAAAAA (2) 3.3 0.0033 P6.5 retina CCTACAGATA 1.7 0.0017 P10.5 crx- retina AGAGTTCAGA 11.1 0.0111 P10.5 crx- retina CCTACAGATA 7.4 0.0074 P10.5 crx- retina AGCTTGAACA 3.7 0.0037 P10.5 crx- retina TGGTGAAAAA (2) 1.9 0.0019 P10.5 crx+ retina AGAGTTCAGA 7.7 0.0077 P10.5 crx+ retina TGGTGACACA 5.8 0.0058 P10.5 crx+ retina TGGTGAAAAA (2) 3.8 0.0038 P10.5 crx+ retina CCTACAGATA 1.9 0.0019 Adult retinal AGAGTTCAGA 7.4 0.0074 Adult retinal TGGTGAAAAA (2) 3.7 0.0037 Adult retinal AGCTTGAACA 1.9 0.0019 Adult retinal CCTACAGATA 1.9 0.0019 ONL AGAGTTCAGA 3.8 0.0038 ONL CCTACAGATA 3.8 0.0038 ONL TGGTGAAAAA (2) 1.9 0.0019