Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.30068	Sgta	small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	10	10 43.0 cM	52551
Gene Ontology	cellular_component unknown | protein binding | protein folding | protein heterodimerization activity
Human Homolog	SGTA[small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 36 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGGCATCAG (2) 16.3 0.0163 P8 Cb GC GCTTCGAGCT (2) 1.6 0.0016 Cb medulloblastoma ATGGCATCAG (2) 13.9 0.0139 Cb medulloblastoma ACCCCCCAAG 2.3 0.0023 P8 GC+1d culture ATGGCATCAG (2) 14.8 0.0148 P8 GC+1d culture TTAAGACGGA 1.1 0.0011 P8 GC+SHH+1d culture ATGGCATCAG (2) 8.2 0.0082 3T3 fibroblasts ATGGCATCAG (2) 17.5 0.0175 3T3 fibroblasts ACCCCCCAAG 7 0.007 E15 cortex ATGGCATCAG (2) 4.9 0.0049 P1 cortex ATGGCATCAG (2) 18.2 0.0182 Hypothalamus ATGGCATCAG (2) 5.4 0.0054 Hypothalamus ACCCCCCAAG 1.8 0.0018 E12.5 retina ATGGCATCAG (2) 15 0.015 E12.5 retina ACCCCCCAAG 1.9 0.0019 E12.5 retina TTAAGACGGA 1.9 0.0019 E14.5 retina ATGGCATCAG (2) 14.6 0.0146 E16.5 retina ATGGCATCAG (2) 10.9 0.0109 E16.5 retina ACCCCCCAAG 1.8 0.0018 E16.5 retina GCTTCGAGCT (2) 1.8 0.0018 E18.5 retina ATGGCATCAG (2) 16.4 0.0164 E18.5 retina GCTTCGAGCT (2) 1.8 0.0018 P0.5 retina ATGGCATCAG (2) 7.9 0.0079 P2.5 retina ATGGCATCAG (2) 12.3 0.0123 P2.5 retina GCTTCGAGCT (2) 1.8 0.0018 P4.5 retina ATGGCATCAG (2) 7.9 0.0079 P4.5 retina GCTTCGAGCT (2) 2 0.002 P6.5 retina ATGGCATCAG (2) 16.7 0.0167 P6.5 retina ACCCCCCAAG 1.7 0.0017 P6.5 retina GCTTCGAGCT (2) 1.7 0.0017 P10.5 crx- retina ATGGCATCAG (2) 9.3 0.0093 P10.5 crx- retina ACCCCCCAAG 3.7 0.0037 P10.5 crx+ retina ATGGCATCAG (2) 17.3 0.0173 Adult retinal ATGGCATCAG (2) 11.1 0.0111 Adult retinal TTAAGACGGA 1.9 0.0019 ONL ATGGCATCAG (2) 5.7 0.0057