Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.30085	Akr1a4	aldo-keto reductase family 1, member A4 (aldehyde reductase)	4		58810
Gene Ontology	alcohol dehydrogenase (NADP+) activity | aldehyde reductase activity | aldehyde reductase activity | biological_process unknown | cellular_component unknown | oxidoreductase activity
Human Homolog	AKR1A1[aldo-keto reductase family 1, member A1 (aldehyde reductase)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 47 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATTACGGTGG (2) 13.1 0.0131 P8 Cb GC CCCTTAGCGC (2) 3.3 0.0033 P8 Cb GC GCCGATCTCC (2) 3.3 0.0033 P8 Cb GC GAAGAGTGAG 1.6 0.0016 Cb medulloblastoma ATTACGGTGG (2) 11.6 0.0116 Cb medulloblastoma GCCGATCTCC (2) 4.6 0.0046 Cb medulloblastoma CCCTTAGCGC (2) 2.3 0.0023 Cb medulloblastoma GAAGAGTGAG 2.3 0.0023 P8 GC+1d culture ATTACGGTGG (2) 33.1 0.0331 P8 GC+1d culture GAAGAGTGAG 1.1 0.0011 P8 GC+1d culture GCCGATCTCC (2) 1.1 0.0011 P8 GC+1d culture TTTTTCAGCT 1.1 0.0011 P8 GC+SHH+1d culture ATTACGGTGG (2) 36.3 0.0363 P8 GC+SHH+1d culture GAAGAGTGAG 1.2 0.0012 3T3 fibroblasts ATTACGGTGG (2) 42.1 0.0421 E15 cortex ATTACGGTGG (2) 39.6 0.0396 E15 cortex CTGCACTCCC 4.9 0.0049 P1 cortex ATTACGGTGG (2) 27.3 0.0273 Hypothalamus ATTACGGTGG (2) 5.4 0.0054 Hypothalamus CCCTTAGCGC (2) 1.8 0.0018 Hypothalamus GCCGATCTCC (2) 1.8 0.0018 Hypothalamus GGCACAATAT 1.8 0.0018 Hypothalamus TTTTTCAGCT 1.8 0.0018 E12.5 retina ATTACGGTGG (2) 7.5 0.0075 E14.5 retina ATTACGGTGG (2) 10.9 0.0109 E14.5 retina CCCTTAGCGC (2) 1.8 0.0018 E14.5 retina CTGCACTCCC 1.8 0.0018 E14.5 retina GGCACAATAT 1.8 0.0018 E16.5 retina ATTACGGTGG (2) 14.5 0.0145 E16.5 retina GGCACAATAT 3.6 0.0036 E16.5 retina GCCGATCTCC (2) 1.8 0.0018 E18.5 retina ATTACGGTGG (2) 7.3 0.0073 P0.5 retina ATTACGGTGG (2) 35.3 0.0353 P0.5 retina GCCGATCTCC (2) 2 0.002 P2.5 retina ATTACGGTGG (2) 8.8 0.0088 P2.5 retina GGCACAATAT 1.8 0.0018 P4.5 retina ATTACGGTGG (2) 17.8 0.0178 P6.5 retina ATTACGGTGG (2) 20 0.02 P6.5 retina TTTTTCAGCT 1.7 0.0017 P10.5 crx- retina ATTACGGTGG (2) 24.2 0.0242 P10.5 crx+ retina ATTACGGTGG (2) 25 0.025 P10.5 crx+ retina CCCTTAGCGC (2) 1.9 0.0019 P10.5 crx+ retina CTGCACTCCC 1.9 0.0019 P10.5 crx+ retina GAAGAGTGAG 1.9 0.0019 Adult retinal ATTACGGTGG (2) 9.3 0.0093 ONL ATTACGGTGG (2) 9.6 0.0096 ONL GCCGATCTCC (2) 1.9 0.0019