Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.302083	3830408D07Rik	RIKEN cDNA 3830408D07 gene	8		70685
Mm.302083	1110035E04Rik	RIKEN cDNA 1110035E04 gene	8		68672
Mm.302083	Nfat5	nuclear factor of activated T-cells 5	8	8 53.0 cM	54446
Mm.302083	C430050I21Rik	RIKEN cDNA C430050I21 gene	8		77602
Mm.302083	B130038B15Rik	RIKEN cDNA B130038B15 gene	8		319771
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 31 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATTTATTAAA (7) 1.6 0.0016 P8 Cb GC GTGCAGTGGT (6) 1.6 0.0016 Cb medulloblastoma CTAAGCCTCA (5) 2.3 0.0023 P8 GC+1d culture ATTTATTAAA (7) 2.3 0.0023 P8 GC+1d culture TTCTCAAGTG (5) 2.3 0.0023 P8 GC+SHH+1d culture ATTTATTAAA (7) 1.2 0.0012 P8 GC+SHH+1d culture CAGATGCAGT (5) 1.2 0.0012 P8 GC+SHH+1d culture TTCTCAAGTG (5) 1.2 0.0012 3T3 fibroblasts CAGATGCAGT (5) 3.5 0.0035 E15 cortex TTCTCAAGTG (5) 4.9 0.0049 P1 cortex ATTTATTAAA (7) 4.5 0.0045 Hypothalamus ATTTATTAAA (7) 3.6 0.0036 E12.5 retina CAGATGCAGT (5) 1.9 0.0019 E16.5 retina ATTTATTAAA (7) 1.8 0.0018 E16.5 retina CTTTTAATGC (6) 1.8 0.0018 E16.5 retina GTGCAGTGGT (6) 1.8 0.0018 E16.5 retina TTCTCAAGTG (5) 1.8 0.0018 E18.5 retina ATTTATTAAA (7) 3.6 0.0036 E18.5 retina GTGCAGTGGT (6) 1.8 0.0018 P2.5 retina CTTTTAATGC (6) 1.8 0.0018 P4.5 retina CTAAGCCTCA (5) 2 0.002 P4.5 retina TTCTCAAGTG (5) 2 0.002 P6.5 retina ATTTATTAAA (7) 1.7 0.0017 P6.5 retina TTCTCAAGTG (5) 1.7 0.0017 P10.5 crx- retina TTCTCAAGTG (5) 3.7 0.0037 P10.5 crx- retina CAGATGCAGT (5) 1.9 0.0019 P10.5 crx+ retina TTTTAAAAAG (5) 3.8 0.0038 P10.5 crx+ retina CTAAGCCTCA (5) 1.9 0.0019 Adult retinal CTTTTAATGC (6) 1.9 0.0019 ONL ATTTATTAAA (7) 1.9 0.0019 ONL TTTTAAAAAG (5) 1.9 0.0019