Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.30249	Galnt1	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1	18		14423
Gene Ontology	extracellular space | Golgi apparatus | integral to membrane | manganese ion binding | O-linked glycosylation | polypeptide N-acetylgalactosaminyltransferase activity | sugar binding | transferase activity | transferase activity, transferring glycosyl groups
Human Homolog	GALNT1[UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 43 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  Cb medulloblastoma CTCAAAAAAA (2) 6.9 0.0069 P8 GC+1d culture CTCAAAAAAA (2) 5.7 0.0057 P8 GC+1d culture CCCAAGACTC (2) 2.3 0.0023 P8 GC+1d culture CTCAGAAAAA 1.1 0.0011 P8 GC+1d culture GGTACTTTTA (4) 1.1 0.0011 P8 GC+1d culture TTAAGAAACT 1.1 0.0011 P8 GC+SHH+1d culture GATGCTTCTA 2.3 0.0023 P8 GC+SHH+1d culture GGTACTTTTA (4) 2.3 0.0023 P8 GC+SHH+1d culture CTCAAAAAAA (2) 1.2 0.0012 P8 GC+SHH+1d culture TTAAGAAACT 1.2 0.0012 3T3 fibroblasts CTCAAAAAAA (2) 3.5 0.0035 P1 cortex AAAATAATTT (2) 4.5 0.0045 Hypothalamus AAAATAATTT (2) 3.6 0.0036 Hypothalamus GGGAGTCTCT 1.8 0.0018 Hypothalamus TTAAGAAACT 1.8 0.0018 E12.5 retina CTCAAAAAAA (2) 1.9 0.0019 E12.5 retina GATGCTTCTA 1.9 0.0019 E12.5 retina GGGAGTCTCT 1.9 0.0019 E12.5 retina GGTACTTTTA (4) 1.9 0.0019 E14.5 retina AAAATAATTT (2) 1.8 0.0018 E14.5 retina CCCAAGACTC (2) 1.8 0.0018 E14.5 retina CTCAAAAAAA (2) 1.8 0.0018 E14.5 retina CTCAGAAAAA 1.8 0.0018 E16.5 retina TTAAGAAACT 3.6 0.0036 E16.5 retina CTCAGAAAAA 1.8 0.0018 E16.5 retina GGTACTTTTA (4) 1.8 0.0018 E18.5 retina AAAATAATTT (2) 1.8 0.0018 E18.5 retina CTCAAAAAAA (2) 1.8 0.0018 E18.5 retina CTCAGAAAAA 1.8 0.0018 E18.5 retina GATGCTTCTA 1.8 0.0018 P0.5 retina GGTACTTTTA (4) 3.9 0.0039 P2.5 retina CTCAAAAAAA (2) 1.8 0.0018 P4.5 retina CTCAAAAAAA (2) 5.9 0.0059 P4.5 retina CTCAGAAAAA 2 0.002 P4.5 retina GGTACTTTTA (4) 2 0.002 P6.5 retina GATGCTTCTA 1.7 0.0017 P10.5 crx- retina AAAATAATTT (2) 1.9 0.0019 P10.5 crx+ retina GATGCTTCTA 1.9 0.0019 P10.5 crx+ retina GGGAGTCTCT 1.9 0.0019 P10.5 crx+ retina GGTACTTTTA (4) 1.9 0.0019 Adult retinal CCCAAGACTC (2) 1.9 0.0019 Adult retinal CTCAAAAAAA (2) 1.9 0.0019 ONL CTCAAAAAAA (2) 1.9 0.0019