Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.30270	Psma4	proteasome (prosome, macropain) subunit, alpha type 4	9		26441
Gene Ontology	cytosol | endopeptidase activity | hydrolase activity | peptidase activity | proteasome core complex (sensu Eukarya) | ubiquitin-dependent protein catabolism
Human Homolog	PSMA4[proteasome (prosome, macropain) subunit, alpha type, 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 47 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCTGTCCAGT 35.9 0.0359 P8 Cb GC GTCTACAGAG (2) 4.9 0.0049 P8 Cb GC AAGAGGAAGA 3.3 0.0033 Cb medulloblastoma TCTGTCCAGT 23.1 0.0231 Cb medulloblastoma GTCTACAGAG (2) 2.3 0.0023 P8 GC+1d culture TCTGTCCAGT 17.1 0.0171 P8 GC+1d culture GTCTACAGAG (2) 3.4 0.0034 P8 GC+1d culture AAGAGGAAGA 1.1 0.0011 P8 GC+SHH+1d culture TCTGTCCAGT 17.6 0.0176 P8 GC+SHH+1d culture GTCTACAGAG (2) 2.3 0.0023 P8 GC+SHH+1d culture AAGAGGAAGA 1.2 0.0012 P8 GC+SHH+1d culture GACCCAATTC 1.2 0.0012 3T3 fibroblasts TCTGTCCAGT 14 0.014 3T3 fibroblasts GTCTACAGAG (2) 3.5 0.0035 E15 cortex TCTGTCCAGT 9.9 0.0099 E15 cortex GTCTACAGAG (2) 4.9 0.0049 P1 cortex GTCTACAGAG (2) 13.6 0.0136 Hypothalamus TCTGTCCAGT 12.7 0.0127 Hypothalamus AAGAGGAAGA 1.8 0.0018 Hypothalamus GTCTACAGAG (2) 1.8 0.0018 E12.5 retina TCTGTCCAGT 16.9 0.0169 E12.5 retina GACCCAATTC 1.9 0.0019 E14.5 retina TCTGTCCAGT 12.8 0.0128 E14.5 retina GTCTACAGAG (2) 7.3 0.0073 E14.5 retina AAGAGGAAGA 3.6 0.0036 E16.5 retina TCTGTCCAGT 14.5 0.0145 E16.5 retina AAGAGGAAGA 1.8 0.0018 E16.5 retina GTCTACAGAG (2) 1.8 0.0018 E18.5 retina TCTGTCCAGT 23.6 0.0236 E18.5 retina GTCTACAGAG (2) 5.5 0.0055 P0.5 retina TCTGTCCAGT 11.8 0.0118 P0.5 retina GTCTACAGAG (2) 3.9 0.0039 P0.5 retina GACCCAATTC 2 0.002 P2.5 retina TCTGTCCAGT 12.3 0.0123 P4.5 retina TCTGTCCAGT 9.9 0.0099 P4.5 retina GTCTACAGAG (2) 7.9 0.0079 P6.5 retina TCTGTCCAGT 10 0.01 P6.5 retina GTCTACAGAG (2) 5 0.005 P10.5 crx- retina TCTGTCCAGT 13 0.013 P10.5 crx- retina GTCTACAGAG (2) 3.7 0.0037 P10.5 crx- retina AAGAGGAAGA 1.9 0.0019 P10.5 crx+ retina TCTGTCCAGT 26.9 0.0269 P10.5 crx+ retina GTCTACAGAG (2) 7.7 0.0077 Adult retinal GTCTACAGAG (2) 3.7 0.0037 Adult retinal TCTGTCCAGT 1.9 0.0019 ONL GTCTACAGAG (2) 11.5 0.0115 ONL TCTGTCCAGT 1.9 0.0019