Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.325800
Snn
stannin
16
20621
Gene Ontology
biological_process unknown
|
integral to membrane
|
molecular_function unknown
Human Homolog
SNN[stannin]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 43 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGTGGAAAGA
(
2
)
6.5
0.0065
Cb medulloblastoma
TGTGGAAAGA
(
2
)
34.7
0.0347
Cb medulloblastoma
AGAATAGGAC
(
3
)
2.3
0.0023
Cb medulloblastoma
CAAGTCTTCC
(
3
)
2.3
0.0023
P8 GC+1d culture
TGTGGAAAGA
(
2
)
18.3
0.0183
P8 GC+1d culture
CAAGTCTTCC
(
3
)
9.1
0.0091
P8 GC+SHH+1d culture
TGTGGAAAGA
(
2
)
10.5
0.0105
P8 GC+SHH+1d culture
CAAGTCTTCC
(
3
)
4.7
0.0047
P8 GC+SHH+1d culture
AGAATAGGAC
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
GTTCTGTTTG
(
2
)
1.2
0.0012
E15 cortex
TGTGGAAAGA
(
2
)
14.8
0.0148
E15 cortex
GATCCAAGGC
(
2
)
4.9
0.0049
E15 cortex
GTTCTGTTTG
(
2
)
4.9
0.0049
P1 cortex
CAAGTCTTCC
(
3
)
13.6
0.0136
P1 cortex
TGTGGAAAGA
(
2
)
9.1
0.0091
Hypothalamus
TGTGGAAAGA
(
2
)
18.1
0.0181
Hypothalamus
CAAGTCTTCC
(
3
)
1.8
0.0018
E12.5 retina
TGTGGAAAGA
(
2
)
13.1
0.0131
E12.5 retina
AGAATAGGAC
(
3
)
1.9
0.0019
E12.5 retina
CAAGTCTTCC
(
3
)
1.9
0.0019
E12.5 retina
GATCCAAGGC
(
2
)
1.9
0.0019
E14.5 retina
TGTGGAAAGA
(
2
)
40.1
0.0401
E14.5 retina
AGAATAGGAC
(
3
)
1.8
0.0018
E14.5 retina
CAAGTCTTCC
(
3
)
1.8
0.0018
E16.5 retina
TGTGGAAAGA
(
2
)
16.3
0.0163
E16.5 retina
AGAATAGGAC
(
3
)
3.6
0.0036
E18.5 retina
TGTGGAAAGA
(
2
)
14.6
0.0146
E18.5 retina
CAAGTCTTCC
(
3
)
1.8
0.0018
P0.5 retina
CAAGTCTTCC
(
3
)
11.8
0.0118
P0.5 retina
TGTGGAAAGA
(
2
)
3.9
0.0039
P2.5 retina
TGTGGAAAGA
(
2
)
7
0.007
P2.5 retina
GATCCAAGGC
(
2
)
1.8
0.0018
P4.5 retina
TGTGGAAAGA
(
2
)
11.9
0.0119
P6.5 retina
TGTGGAAAGA
(
2
)
10
0.01
P6.5 retina
CAAGTCTTCC
(
3
)
5
0.005
P6.5 retina
GATCCAAGGC
(
2
)
1.7
0.0017
P6.5 retina
GTTCTGTTTG
(
2
)
1.7
0.0017
P10.5 crx- retina
TGTGGAAAGA
(
2
)
29.7
0.0297
P10.5 crx+ retina
TGTGGAAAGA
(
2
)
11.5
0.0115
P10.5 crx+ retina
AGAATAGGAC
(
3
)
1.9
0.0019
Adult retinal
TGTGGAAAGA
(
2
)
5.6
0.0056
Adult retinal
AGAATAGGAC
(
3
)
3.7
0.0037
Adult retinal
CAAGTCTTCC
(
3
)
1.9
0.0019
